1BKD image
Deposition Date 1998-07-06
Release Date 1999-01-13
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1BKD
Title:
COMPLEX OF HUMAN H-RAS WITH HUMAN SOS-1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
I 4 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:H-RAS
Gene (Uniprot):HRAS
Chain IDs:A (auth: R)
Chain Length:166
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SON OF SEVENLESS-1
Gene (Uniprot):SOS1
Chain IDs:B (auth: S)
Chain Length:477
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
The structural basis of the activation of Ras by Sos.
Nature 394 337 343 (1998)
PMID: 9690470 DOI: 10.1038/28548

Abstact

The crystal structure of human H-Ras complexed with the Ras guanine-nucleotide-exchange-factor region of the Son of sevenless (Sos) protein has been determined at 2.8 A resolution. The normally tight interaction of nucleotides with Ras is disrupted by Sos in two ways. First, the insertion into Ras of an alpha-helix from Sos results in the displacement of the Switch 1 region of Ras, opening up the nucleotide-binding site. Second, side chains presented by this helix and by a distorted conformation of the Switch 2 region of Ras alter the chemical environment of the binding site for the phosphate groups of the nucleotide and the associated magnesium ion, so that their binding is no longer favoured. Sos does not impede the binding sites for the base and the ribose of GTP or GDP, so the Ras-Sos complex adopts a structure that allows nucleotide release and rebinding.

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Primary Citation of related structures
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