1BBT image
Deposition Date 1992-05-18
Release Date 1994-01-31
Last Version Date 2024-02-07
Entry Detail
PDB ID:
1BBT
Keywords:
Title:
METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
I 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP1)
Chain IDs:A (auth: 1)
Chain Length:213
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2)
Chain IDs:B (auth: 2)
Chain Length:218
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3)
Chain IDs:C (auth: 3)
Chain Length:220
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP4)
Chain IDs:D (auth: 4)
Chain Length:85
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Ligand Molecules
Primary Citation

Abstact

The structure of foot-and-mouth disease virus (FMDV) strain O1 BFS 1860 has been determined to 2.9 A resolution using the molecular-replacement method [Acharya, Fry, Stuart, Fox, Rowlands & Brown (1989). Nature (London), 337, 709-716]. Crystals of the virus with average dimensions 0.12 x 0.06 x 0.12 mm belong to space group I23, a = 345 A with 1/12 of the icosahedral particle per asymmetric unit giving fivefold noncrystallographic redundancy. Oscillation diffraction photographs were collected at the SERC Synchrotron Radiation Source at Daresbury in accordance with strict disease security regulations. The ambiguity in particle orientation was resolved using a self-rotation function and starting estimates of the phases to 8 A were derived from the known structures of two picornaviruses similarly oriented in the I23 unit cell. The phases were refined and extended using iterative averaging and solvent flattening with the implementation of a simple automatic envelope-determination procedure to increase the phasing power available.

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Protein

Chemical

Disease

Primary Citation of related structures