1B8W image
Deposition Date 1999-02-02
Release Date 1999-09-15
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1B8W
Keywords:
Title:
DEFENSIN-LIKE PEPTIDE 1
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
1000
Conformers Submitted:
20
Selection Criteria:
LEAST RESTRAINT VIOLATION
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (DEFENSIN-LIKE PEPTIDE 1)
Chain IDs:A
Chain Length:42
Number of Molecules:1
Biological Source:Ornithorhynchus anatinus
Ligand Molecules
Primary Citation

Abstact

Three defensin-like peptides (DLPs) were isolated from platypus venom and sequenced. One of these peptides, DLP-1, was synthesized chemically and its three-dimensional structure was determined using NMR spectroscopy. The main structural elements of this 42-residue peptide were an anti-parallel beta-sheet comprising residues 15-18 and 37-40 and a small 3(10) helix spanning residues 10-12. The overall three-dimensional fold is similar to that of beta-defensin-12, and similar to the sodium-channel neurotoxin ShI (Stichodactyla helianthus neurotoxin I). However, the side chains known to be functionally important in beta-defensin-12 and ShI are not conserved in DLP-1, suggesting that it has a different biological function. Consistent with this contention, we showed that DLP-1 possesses no anti-microbial properties and has no observable activity on rat dorsal-root-ganglion sodium-channel currents.

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Primary Citation of related structures