1B0I image
Deposition Date 1998-11-10
Release Date 1999-11-17
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1B0I
Keywords:
Title:
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.21
R-Value Work:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (ALPHA-AMYLASE)
Gene (Uniprot):amy
Chain IDs:A
Chain Length:453
Number of Molecules:1
Biological Source:Pseudoalteromonas haloplanktis
Primary Citation
Structures of the psychrophilic Alteromonas haloplanctis alpha-amylase give insights into cold adaptation at a molecular level.
Structure 6 1503 1506 (1998)
PMID: 9862804 DOI: 10.1016/S0969-2126(98)00149-X

Abstact

BACKGROUND . Enzymes from psychrophilic (cold-adapted) microorganisms operate at temperatures close to 0 degreesC, where the activity of their mesophilic and thermophilic counterparts is drastically reduced. It has generally been assumed that thermophily is associated with rigid proteins, whereas psychrophilic enzymes have a tendency to be more flexible. RESULTS . Insights into the cold adaptation of proteins are gained on the basis of a psychrophilic protein's molecular structure. To this end, we have determined the structure of the recombinant form of a psychrophilic alpha-amylase from Alteromonas haloplanctis at 2.4 A resolution. We have compared this with the structure of the wild-type enzyme, recently solved at 2.0 A resolution, and with available structures of their mesophilic counterparts. These comparative studies have enabled us to identify possible determinants of cold adaptation. CONCLUSIONS . We propose that an increased resilience of the molecular surface and a less rigid protein core, with less interdomain interactions, are determining factors of the conformational flexibility that allows efficient enzyme catalysis in cold environments.

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Primary Citation of related structures
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