1AT5 image
Entry Detail
PDB ID:
1AT5
Keywords:
Title:
HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
1997-08-18
Release Date:
1998-02-25
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:LYSOZYME
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Gallus gallus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SNN A ASN L-3-AMINOSUCCINIMIDE
Peptide-like Molecules
PRD_900017
Primary Citation
Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol. 278 231 238 (1998)
PMID: 9571046 DOI: 10.1006/jmbi.1998.1674

Abstact

The isomerization of Asp101 to isoaspartate autocatalytically proceeds via a succinimide intermediate in hen egg-white lysozyme at a mildly acidic condition. The crystal structures of succinimide and isoaspartate forms of the lysozyme proteins, each complexed with a tri-N-acetylchitotriose ligand, have been determined at 1.8 A resolution, and distinctively elucidate coplanar cyclic aminosuccinyl and beta-linked isoaspartyl residues. Compared with the liganded native protein with normal Asp101, succinimide 101 protrudes toward the ligand, and isoaspartate 101 extends away from the ligand. The formations of these residues caused the loss of three hydrogen-bonds between the ligand and the side-chains of Asp101 and Asn103 along with 0.5 A displacement of the ligand location.

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Primary Citation of related structures