1AIK image
Deposition Date 1997-04-20
Release Date 1997-06-16
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1AIK
Keywords:
Title:
HIV GP41 CORE STRUCTURE
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 3 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 GP41 GLYCOPROTEIN
Gene (Uniprot):env
Chain IDs:B (auth: C)
Chain Length:35
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 GP41 GLYCOPROTEIN
Gene (Uniprot):env
Chain IDs:A (auth: N)
Chain Length:37
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
Primary Citation
Core structure of gp41 from the HIV envelope glycoprotein.
Cell(Cambridge,Mass.) 89 263 273 (1997)
PMID: 9108481 DOI: 10.1016/S0092-8674(00)80205-6

Abstact

The envelope glycoprotein of human immunodeficiency virus type 1 (HIV-1) consists of a complex of gp120 and gp41. gp120 determines viral tropism by binding to target-cell receptors, while gp41 mediates fusion between viral and cellular membranes. Previous studies identified an alpha-helical domain within gp41 composed of a trimer of two interacting peptides. The crystal structure of this complex, composed of the peptides N36 and C34, is a six-helical bundle. Three N36 helices form an interior, parallel coiled-coil trimer, while three C34 helices pack in an oblique, antiparallel manner into highly conserved, hydrophobic grooves on the surface of this trimer. This structure shows striking similarity to the low-pH-induced conformation of influenza hemagglutinin and likely represents the core of fusion-active gp41. Avenues for the design/discovery of small-molecule inhibitors of HIV infection are directly suggested by this structure.

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Primary Citation of related structures
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