ISDA: 1A7Y

Deposition Date 1998-03-19

Release Date 1999-03-23

Last Version Date 2024-11-20

Entry Detail

PDB ID:

1A7Y

Keywords:

ANTIBIOTIC

Title:

CRYSTAL STRUCTURE OF ACTINOMYCIN D

Biological Source:

Source Organism:

STREPTOMYCES ANTIBIOTICUS (Taxon ID: 1890)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

0.94 Å

R-Value Free:

0.06

R-Value Observed:

0.05

Space Group:

P 1

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Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:ACTINOMYCIN D
Chain IDs:A, B, C
Chain Length:11
Number of Molecules:3
Biological Source:STREPTOMYCES ANTIBIOTICUS

Ligand Molecules

EEE

MOH

Peptide-like Molecules

PRD_000001

Primary Citation

Crystal Structures of Actinomycin D and Actinomycin Z3.

Schafer, M, Sheldrick, G.M, Bahner, I, Lackner, H.Show

Angew.Chem.Int.Ed.Engl. 37 2381 2384 (1998)

PMID: 29710967 DOI: 10.1002/(SICI)1521-3773(19980918)37:17<2381::AID-ANIE2381>3.0.CO;2-L

Abstact

Untwinned single crystals of the actinomycins D and Z3 that diffracted to atomic resolution could be obtained for the first time. Low-temperature data collection and a new ab initio method for solving the structures led to precise crystal structures which showed, for example, that the unit cell of actinomycin D contains three molecules, two of which are present in the form of a hydrogen-bridged dimer related by a pseudo-twofold axis (see picture).

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Primary Citation of related structures