1A2S image
Deposition Date 1998-01-10
Release Date 1998-04-29
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1A2S
Title:
THE SOLUTION NMR STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGA MONORAPHIDIUM BRAUNII, MINIMIZED AVERAGE STRUCTURE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
1
Selection Criteria:
MINIMIZED AVERAGE STRUCTURE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CYTOCHROME C6
Gene (Uniprot):petJ
Chain IDs:A
Chain Length:89
Number of Molecules:1
Biological Source:Monoraphidium braunii
Ligand Molecules
Primary Citation
Solution structure of oxidized cytochrome c6 from the green alga Monoraphidium braunii.
Biochemistry 37 4831 4843 (1998)
PMID: 9538000 DOI: 10.1021/bi972765y

Abstact

Cytochrome c6 from Monoraphidium braunii, an 89-amino acid electron transfer protein, has been investigated by NMR in solution, in its oxidized form, at pH 7 and 300 K. By using a combination of COSY, TOCSY, and NOESY experiments, 84% of the proton resonances have been assigned. A total of 1668 experimental NOE constraints, 1109 of which were meaningful, together with 288 pseudocontact shifts, have been used to determine the structure in solution. This is represented as a family of 40 structures which have been energy minimized. The rmsd values with respect to the mean structure are 0.57 +/- 0.08 and 0.94 +/- 0.09 A for the backbone and heavy atoms, respectively. The structure has been found to be very similar to that of the reduced form, except for a rearrangement in propionate 7, a feature which has been observed in all c-type cytochromes investigated so far. Such a feature could be relevant for the efficiency of the electron transfer pathway with either the oxidizing or the reducing partners. Other differences in the oxidation states have been noted in the region proposed to be involved in the interaction with the physiological partners.

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Primary Citation of related structures