Chemical Name and Ids:
Chemical ID :
SY5
IUPAC Name :
2-[[[(3~{R},5~{R})-3-azanyl-6-(3-azanylpropylamino)-5-oxidanyl-hexanoyl]amino]-methyl-amino]ethanoic acid
Synonyms :
N6-(3-aminopropyl)-negamycin
Chemical Database ID Mapping:
ChEMBL :
CHEMBL3621799
PubChem :
122191421
ZINC :
ZINC000473123282
Physiochemical Descriptor Information:
Formula :
C12 H27 N5 O4
Molecular Weight :
305.374
Hydrogen Bond Acceptor :
8
Hydrogen Bond Donor :
6
LogP :
-2.559
Rotatable Bonds :
16
Heavy Atoms :
21
Chemical Descriptors
  • InChI: InChI=1S/C12H27N5O4/c1-17(8-12(20)21)16-11(19)6-9(14)5-10(18)7-15-4-2-3-13/h9-10,15,18H,2-8,13-14H2,1H3,(H,16,19)(H,20,21)/t9-,10-/m1/s1
  • InChIKey: VBFFWDLIKBQABV-NXEZZACHSA-N
  • SMILES: CN(CC(=O)O)NC(=O)C[C@@H](C[C@H](CNCCCN)O)N
PDB IDs
PDB Chains selected:
PDB Ids selected:
Experimental Distribution
Organism Distribution (Top 15)
Publication Year Distribution