Chemical Name and Ids:
Chemical ID :
C2E
IUPAC Name :
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
Synonyms :
c-di-GMP; Cyclic diguanosine monophosphate
Chemical Database ID Mapping:
ChEMBL :
CHEMBL1231573
PubChem :
135440063
ChEBI :
49537
ZINC :
ZINC000072319544
SureChEMBL :
SCHEMBL17974376
Physiochemical Descriptor Information:
Formula :
C20 H24 N10 O14 P2
Molecular Weight :
690.411
Hydrogen Bond Acceptor :
22
Hydrogen Bond Donor :
8
LogP :
-2.866
Rotatable Bonds :
8
Heavy Atoms :
46
Chemical Descriptors
  • SMILES: c1nc2c(n1[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@@](=O)(O[C@@H]5[C@@H](CO[P@@](=O)(O4)O)O[C@H]([C@@H]5O)n6cnc7c6N=C(NC7=O)N)O)O)N=C(NC2=O)N
  • InChI: InChI=1S/C20H24N10O14P2/c21-19-25-13-7(15(33)27-19)23-3-29(13)17-9(31)11-5(41-17)1-39-45(35,36)44-12-6(2-40-46(37,38)43-11)42-18(10(12)32)30-4-24-8-14(30)26-20(22)28-16(8)34/h3-6,9-12,17-18,31-32H,1-2H2,(H,35,36)(H,37,38)(H3,21,25,27,33)(H3,22,26,28,34)/t5-,6-,9-,10-,11-,12-,17-,18-/m1/s1
  • InChIKey: PKFDLKSEZWEFGL-MHARETSRSA-N
PDB IDs
PDB Chains selected:
PDB Ids selected:
Experimental Distribution
Organism Distribution (Top 15)
Publication Year Distribution