ISDA: 9YDV

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: A1CVS

IUPAC Name: 1-{5-O-[(R)-hydroxy(phosphonomethyl)phosphoryl]-beta-D-ribofuranosyl}-2-sulfanylidene-2,3-dihydropyrimidin-4(1H)-one

Formal Charge: 0

Type: non-polymer

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ccn([C@H]2CCCO2)c(=S)[nH]1

InChI: InChI=1S/C8H10N2O2S/c11-6-3-4-10(8(13)9-6)7-2-1-5-12-7/h3-4,7H,1-2,5H2,(H,9,11,13)/t7-/m1/s1

InChI Key: ODHVJFXVWXRVSP-SSDOTTSWSA-N

Physiochemical Descriptor:

Formula: C10 H16 N2 O10 P2 S

Molecular weight: 418.254

Hydrogen Bond Acceptor: 12

Hydrogen Bond Donor: 6

Rotatable Bonds: 11

Heavy Atoms: 25

Systematic name

Program	Version	Descriptor
ACDLabs	14.52	1-{5-O-[(R)-hydroxy(phosphonomethyl)phosphoryl]-beta-D-ribofuranosyl}-2-sulfanylidene-2,3-dihydropyrimidin-4(1H)-one
OpenEye OEToolkits	3.1.0.0	[[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(4-oxidanylidene-2-sulfanylidene-pyrimidin-1-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	O=P(O)(O)CP(=O)(O)OCC1OC(N2C=CC(=O)NC2=S)C(O)C1O
InChI	InChI	1.06	InChI=1S/C10H16N2O10P2S/c13-6-1-2-12(10(25)11-6)9-8(15)7(14)5(22-9)3-21-24(19,20)4-23(16,17)18/h1-2,5,7-9,14-15H,3-4H2,(H,19,20)(H,11,13,25)(H2,16,17,18)/t5-,7-,8-,9-/m1/s1
InChIKey	InChI	1.06	VAZIBAQQXATRMK-ZOQUXTDFSA-N
SMILES_CANONICAL	CACTVS	3.385	O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)C[P](O)(O)=O)N2C=CC(=O)NC2=S
SMILES	CACTVS	3.385	O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)C[P](O)(O)=O)N2C=CC(=O)NC2=S
SMILES_CANONICAL	OpenEye OEToolkits	3.1.0.0	C1=CN(C(=S)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(CP(=O)(O)O)O)O)O
SMILES	OpenEye OEToolkits	3.1.0.0	C1=CN(C(=S)NC1=O)C2C(C(C(O2)COP(=O)(CP(=O)(O)O)O)O)O

Chemical Database Mapping

Database	Reference ID
PubChem	44627488
ZINC	ZINC000045324058