Structural Complex
Chemical ID: A1CC9
IUPAC Name: [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[[(3~{S},4~{S},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl] hydrogen phosphate
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@@H]2CC[C@@H](CO[PH](=O)O[PH](=O)O[PH](=O)O[PH](=O)OC[C@@H]3CC[C@H](n4ccc(=O)[nH]c4=O)O3)O2)c(=O)[nH]1
InChI: InChI=1S/C18H26N4O15P4/c23-13-5-7-21(17(25)19-13)15-3-1-11(33-15)9-31-38(27)35-40(29)37-41(30)36-39(28)32-10-12-2-4-16(34-12)22-8-6-14(24)20-18(22)26/h5-8,11-12,15-16,38-41H,1-4,9-10H2,(H,19,23,25)(H,20,24,26)/t11-,12-,15-,16+/m0/s1
InChI Key: QPJBAHAOMQXUQV-GVAFMPQTSA-N
Physiochemical Descriptor:
Formula: C18 H26 N4 O23 P4
Molecular weight: 790.307
Hydrogen Bond Acceptor: 25
Hydrogen Bond Donor: 10
Rotatable Bonds: 22
Heavy Atoms: 49
Systematic name
Program Version Descriptor
OpenEye OEToolkits 3.1.0.0 [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[[(3~{S},4~{S},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C18H26N4O23P4/c23-9-1-3-21(17(29)19-9)15-13(27)11(25)7(41-15)5-39-46(31,32)43-48(35,36)45-49(37,38)44-47(33,34)40-6-8-12(26)14(28)16(42-8)22-4-2-10(24)20-18(22)30/h1-4,7-8,11-16,25-28H,5-6H2,(H,31,32)(H,33,34)(H,35,36)(H,37,38)(H,19,23,29)(H,20,24,30)/t7-,8?,11-,12?,13-,14?,15-,16?/m1/s1
InChIKey InChI 1.06 NMLMACJWHPHKGR-JILDPCHGSA-N
SMILES_CANONICAL CACTVS 3.385 O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OCC2OC(C(O)C2O)N3C=CC(=O)NC3=O)N4C=CC(=O)NC4=O
SMILES CACTVS 3.385 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OCC2OC(C(O)C2O)N3C=CC(=O)NC3=O)N4C=CC(=O)NC4=O
SMILES_CANONICAL OpenEye OEToolkits 3.1.0.0 C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC3[C@H]([C@@H]([C@@H](O3)N4C=CC(=O)NC4=O)O)O)O)O
SMILES OpenEye OEToolkits 3.1.0.0 C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)N4C=CC(=O)NC4=O)O)O)O)O