Structural Complex
Chemical ID: PRD_002330
IUPAC Name: Darobactin
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CCc2c[nH]c3c(cccc23)O[C@@H]2c3c[nH]c4cc(ccc34)C[C@@H](C(=O)NCC(=O)NCCc3ccccc3)NC(=O)CNC(=O)[C@H]2NC(=O)CN1
InChI: InChI=1S/C39H40N8O7/c48-31-12-10-24-17-43-35-25(24)7-4-8-30(35)54-37-27-18-41-28-15-23(9-11-26(27)28)16-29(46-33(50)21-45-39(53)36(37)47-34(51)20-42-31)38(52)44-19-32(49)40-14-13-22-5-2-1-3-6-22/h1-9,11,15,17-18,29,36-37,41,43H,10,12-14,16,19-21H2,(H,40,49)(H,42,48)(H,44,52)(H,45,53)(H,46,50)(H,47,51)/t29-,36-,37+/m0/s1
InChI Key: HQBMCNRDYJHFHA-TVLMAONJSA-N
Physiochemical Descriptor:
Formula: C47 H56 N11 O12
Molecular weight: 967.014
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 14
Rotatable Bonds: 18
Heavy Atoms: 70
Systematic name
Program Version Descriptor
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C47H55N11O12/c48-13-5-9-25-23-11-12-27-28(19-51-30(27)16-23)40-39(58-42(63)31(17-36(50)61)53-41(62)29(49)15-24-18-52-37-26(24)8-4-10-35(37)70-40)46(67)56-34(21-60)44(65)57-38(25)45(66)55-33(20-59)43(64)54-32(47(68)69)14-22-6-2-1-3-7-22/h1-4,6-8,10-12,16,18-19,25,29,31-34,38-40,51-52,59-60H,5,9,13-15,17,20-21,48-49H2,(H2,50,61)(H,53,62)(H,54,64)(H,55,66)(H,56,67)(H,57,65)(H,58,63)(H,68,69)/p+1/t25-,29-,31-,32-,33-,34-,38-,39-,40+/m0/s1
InChIKey InChI 1.06 HRMCRRLPTVSYHJ-KUDSBEMESA-O
SMILES_CANONICAL CACTVS 3.385 N[C@H]1Cc2c[nH]c3c(O[C@H]4[C@H](NC(=O)[C@H](CC(N)=O)NC1=O)C(=O)N[C@@H](CO)C(=O)N[C@@H]([C@@H](CCC[NH3+])c5ccc6c([nH]cc46)c5)C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc7ccccc7)C(O)=O)cccc23
SMILES CACTVS 3.385 N[CH]1Cc2c[nH]c3c(O[CH]4[CH](NC(=O)[CH](CC(N)=O)NC1=O)C(=O)N[CH](CO)C(=O)N[CH]([CH](CCC[NH3+])c5ccc6c([nH]cc46)c5)C(=O)N[CH](CO)C(=O)N[CH](Cc7ccccc7)C(O)=O)cccc23
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1ccc(cc1)C[C@@H](C(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H]2C(c3ccc4c(c3)[nH]cc4[C@@H]5[C@@H](C(=O)N[C@H](C(=O)N2)CO)NC(=O)[C@@H](NC(=O)[C@H](Cc6c[nH]c7c6cccc7O5)N)CC(=O)N)CCC[NH3+]
SMILES OpenEye OEToolkits 2.0.7 c1ccc(cc1)CC(C(=O)O)NC(=O)C(CO)NC(=O)C2C(c3ccc4c(c3)[nH]cc4C5C(C(=O)NC(C(=O)N2)CO)NC(=O)C(NC(=O)C(Cc6c[nH]c7c6cccc7O5)N)CC(=O)N)CCC[NH3+]