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Summary
Structure Feature
Experiment
Ligands & Environment
8K9Q
pdb_00008k9q
10.2210/pdb8k9q/pdb
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D39
Y01
Structural Complex
Chemical ID:
D39
IUPAC Name:
(2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid
Formal Charge:
0
Type:
NON-POLYMER
Physiochemical Descriptor:
Formula:
C40 H76 N O10 P
Molecular weight:
762.006
Hydrogen Bond Acceptor:
11
Hydrogen Bond Donor:
3
Rotatable Bonds:
43
Heavy Atoms:
52
Systematic name
Program
Version
Descriptor
OpenEye OEToolkits
2.0.7
(2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid
Chemical Descriptors
Type
Program
Version
Descriptor
InChI
InChI
1.03
InChI=1S/C40H76NO10P/c1-3-5-7-9-11-13-15-17-18-20-22-24-26-28-30-32-39(43)51-36(34-49-52(46,47)50-35-37(41)40(44)45)33-48-38(42)31-29-27-25-23-21-19-16-14-12-10-8-6-4-2/h17-18,36-37H,3-16,19-35,41H2,1-2H3,(H,44,45)(H,46,47)/b18-17-/t36-,37+/m1/s1
InChIKey
InChI
1.03
OIWCYIUQAVBPGV-DAQGAKHBSA-N
SMILES_CANONICAL
CACTVS
3.385
CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OC[C@H](N)C(O)=O)OC(=O)CCCCCCC\C=C/CCCCCCCC
SMILES
CACTVS
3.385
CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](N)C(O)=O)OC(=O)CCCCCCCC=CCCCCCCCC
SMILES_CANONICAL
OpenEye OEToolkits
2.0.7
CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OC[C@@H](C(=O)O)N)OC(=O)CCCCCCC/C=C\CCCCCCCC
SMILES
OpenEye OEToolkits
2.0.7
CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC(C(=O)O)N)OC(=O)CCCCCCCC=CCCCCCCCC
Chemical Database Mapping
Database
Reference ID
PubChem
91746199
,
5283499
ChEBI
34086
ZINC
ZINC000008437535
SureChEMBL
SCHEMBL234216
HMDB
HMDB0012357
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