Structural Complex
Chemical ID: Q2C
IUPAC Name: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[5-[4-[[4-(2-methoxyethoxy)cyclohexyl]amino]-1-methyl-2-oxidanylidene-quinolin-6-yl]-1,3-thiazol-3-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Formal Charge: 1
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1cc(NC2CCCCC2)c2cc(-c3c[n+]([C@H]4CC[C@@H](CO[PH](=O)O[PH](=O)OC[C@@H]5CC[C@H](n6cnc7cncnc76)O5)O4)cs3)ccc2[nH]1
InChI: InChI=1S/C33H39N7O8P2S/c41-30-13-27(37-22-4-2-1-3-5-22)25-12-21(6-9-26(25)38-30)29-15-39(20-51-29)31-10-7-23(46-31)16-44-49(42)48-50(43)45-17-24-8-11-32(47-24)40-19-36-28-14-34-18-35-33(28)40/h6,9,12-15,18-20,22-24,31-32,49-50H,1-5,7-8,10-11,16-17H2,(H-,37,38,41)/p+1/t23-,24-,31+,32+/m0/s1
InChI Key: KMCLDAKSROTFPK-NJKYLCJSSA-O
Physiochemical Descriptor:
Formula: C37 H49 N8 O16 P2 S
Molecular weight: 955.841
Hydrogen Bond Acceptor: 24
Hydrogen Bond Donor: 8
Rotatable Bonds: 26
Heavy Atoms: 64
Systematic name
Program Version Descriptor
ACDLabs 12.01 (5P)-3-[(2R,3R,4S,5R)-5-({[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxyoxolan-2-yl]-5-(4-{[(1s,4S)-4-(2-methoxyethoxy)cyclohexyl]amino}-1-methyl-2-oxo-1,2-dihydroquinolin-6-yl)-1,3-thiazol-3-ium (non-preferred name)
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[5-[4-[[4-(2-methoxyethoxy)cyclohexyl]amino]-1-methyl-2-oxidanylidene-quinolin-6-yl]-1,3-thiazol-3-ium-3-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 Nc1ncnc2c1ncn2C1OC(COP(=O)(O)OP(=O)(O)OCC2OC([n+]3cc(sc3)c3ccc4N(C)C(=O)C=C(NC5CCC(OCCOC)CC5)c4c3)C(O)C2O)C(O)C1O
InChI InChI 1.03 InChI=1S/C37H48N8O16P2S/c1-43-24-8-3-19(11-22(24)23(12-28(43)46)42-20-4-6-21(7-5-20)56-10-9-55-2)27-13-44(18-64-27)36-32(49)30(47)25(59-36)14-57-62(51,52)61-63(53,54)58-15-26-31(48)33(50)37(60-26)45-17-41-29-34(38)39-16-40-35(29)45/h3,8,11-13,16-18,20-21,25-26,30-33,36-37,47-50H,4-7,9-10,14-15H2,1-2H3,(H4-,38,39,40,42,46,51,52,53,54)/p+1/t20-,21+,25-,26-,30-,31-,32-,33-,36-,37-/m1/s1
InChIKey InChI 1.03 VISHSDFFEFTKEI-QBEAZOKTSA-O
SMILES_CANONICAL CACTVS 3.385 COCCO[C@H]1CC[C@H](CC1)NC2=CC(=O)N(C)c3ccc(cc23)c4sc[n+](c4)[C@@H]5O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]6O[C@H]([C@H](O)[C@@H]6O)n7cnc8c(N)ncnc78)[C@@H](O)[C@H]5O
SMILES CACTVS 3.385 COCCO[CH]1CC[CH](CC1)NC2=CC(=O)N(C)c3ccc(cc23)c4sc[n+](c4)[CH]5O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]6O[CH]([CH](O)[CH]6O)n7cnc8c(N)ncnc78)[CH](O)[CH]5O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 CN1c2ccc(cc2C(=CC1=O)NC3CCC(CC3)OCCOC)c4c[n+](cs4)[C@H]5[C@@H]([C@@H]([C@H](O5)COP(=O)(O)OP(=O)(O)OC[C@@H]6[C@H]([C@H]([C@@H](O6)n7cnc8c7ncnc8N)O)O)O)O
SMILES OpenEye OEToolkits 2.0.7 CN1c2ccc(cc2C(=CC1=O)NC3CCC(CC3)OCCOC)c4c[n+](cs4)C5C(C(C(O5)COP(=O)(O)OP(=O)(O)OCC6C(C(C(O6)n7cnc8c7ncnc8N)O)O)O)O