Structural Complex
Chemical ID: A3P
IUPAC Name: ADENOSINE-3'-5'-DIPHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1
InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula: C10 H15 N5 O10 P2
Molecular weight: 427.201
Hydrogen Bond Acceptor: 15
Hydrogen Bond Donor: 6
Rotatable Bonds: 12
Heavy Atoms: 27
Systematic name
Program Version Descriptor
ACDLabs 10.04 adenosine 3',5'-bis(dihydrogen phosphate)
OpenEye OEToolkits 1.5.0 [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(phosphonooxymethyl)oxolan-3-yl] dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O
SMILES_CANONICAL CACTVS 3.341 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]3O
SMILES CACTVS 3.341 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)OP(=O)(O)O)O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)OP(=O)(O)O)O)N
InChI InChI 1.03 InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(25-27(20,21)22)4(24-10)1-23-26(17,18)19/h2-4,6-7,10,16H,1H2,(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
InChIKey InChI 1.03 WHTCPDAXWFLDIH-KQYNXXCUSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB01812
ChEMBL CHEMBL574817
PubChem 159296
ChEBI 17985
ZINC ZINC000004228234
SureChEMBL SCHEMBL42104
HMDB HMDB0000061