Structural Complex
Chemical ID: AM2
IUPAC Name: APRAMYCIN
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CCC(O[C@@H]2CC[C@@H]3O[C@H](O[C@@H]4CCCCO4)CC[C@H]3O2)CC1
InChI: InChI=1S/C19H32O5/c1-2-6-14(7-3-1)21-18-11-9-16-15(22-18)10-12-19(23-16)24-17-8-4-5-13-20-17/h14-19H,1-13H2/t15-,16+,17-,18+,19-/m1/s1
InChI Key: HVXUKAMESIUQMN-MTHXSQLBSA-N
Physiochemical Descriptor:
Formula: C21 H41 N5 O11
Molecular weight: 539.577
Hydrogen Bond Acceptor: 16
Hydrogen Bond Donor: 11
Rotatable Bonds: 17
Heavy Atoms: 37
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2R,3R,4S,5S,6S)-5-amino-2-{[(2R,3S,4R,4aR,6S,7R,8aS)-7-amino-6-{[(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl]oxy}-4-hydroxy-3-(methylamino)octahydropyrano[3,2-b]pyran-2-yl]oxy}-6-(hydroxymethyl)tetrahydro-2H-pyran-3,4-diol (non-preferred name)
OpenEye OEToolkits 1.5.0 (2R,3R,4S,5S,6S)-2-[[(2R,3S,4R,4aR,6S,7R,8aS)-7-amino-6-[(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxy-cyclohexyl]oxy-4-hydroxy-3-methylamino-2,3,4,4a,6,7,8,8a-octahydropyrano[2,3-e]pyran-2-yl]oxy]-5-amino-6-(hydroxymethyl)oxane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O3C(OC1OC(CO)C(N)C(O)C1O)C(NC)C(O)C4OC(OC2C(N)CC(N)C(O)C2O)C(N)CC34
SMILES_CANONICAL CACTVS 3.341 CN[C@H]1[C@@H](O)[C@H]2O[C@H](O[C@@H]3[C@@H](N)C[C@@H](N)[C@H](O)[C@H]3O)[C@H](N)C[C@@H]2O[C@@H]1O[C@H]4O[C@H](CO)[C@@H](N)[C@H](O)[C@H]4O
SMILES CACTVS 3.341 CN[CH]1[CH](O)[CH]2O[CH](O[CH]3[CH](N)C[CH](N)[CH](O)[CH]3O)[CH](N)C[CH]2O[CH]1O[CH]4O[CH](CO)[CH](N)[CH](O)[CH]4O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CN[C@H]1[C@H]([C@@H]2[C@H](C[C@H]([C@H](O2)O[C@@H]3[C@H](C[C@H]([C@@H]([C@H]3O)O)N)N)N)O[C@@H]1O[C@@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)N)O)O)O
SMILES OpenEye OEToolkits 1.5.0 CNC1C(C2C(CC(C(O2)OC3C(CC(C(C3O)O)N)N)N)OC1OC4C(C(C(C(O4)CO)N)O)O)O
InChI InChI 1.03 InChI=1S/C21H41N5O11/c1-26-11-14(30)18-8(33-20(11)37-21-16(32)13(29)10(25)9(4-27)34-21)3-7(24)19(36-18)35-17-6(23)2-5(22)12(28)15(17)31/h5-21,26-32H,2-4,22-25H2,1H3/t5-,6+,7-,8+,9-,10-,11+,12+,13+,14-,15-,16-,17-,18+,19+,20-,21-/m1/s1
InChIKey InChI 1.03 XZNUGFQTQHRASN-XQENGBIVSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB04626
ChEMBL CHEMBL1230961
PubChem 3081545
ChEBI 2790
ZINC ZINC000008214486
SureChEMBL SCHEMBL18388