Structural Complex
Chemical ID: A2M
IUPAC Name: 2'-O-methyladenosine 5'-(dihydrogen phosphate)
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1
InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula: C11 H16 N5 O7 P
Molecular weight: 361.248
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 4
Rotatable Bonds: 10
Heavy Atoms: 24
Systematic name
Program Version Descriptor
ACDLabs 12.01 2'-O-methyladenosine 5'-(dihydrogen phosphate)
OpenEye OEToolkits 1.7.0 [(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-4-methoxy-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(OC)C3O
SMILES_CANONICAL CACTVS 3.370 CO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3c(N)ncnc23
SMILES CACTVS 3.370 CO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3c(N)ncnc23
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 CO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2ncnc3N)COP(=O)(O)O)O
SMILES OpenEye OEToolkits 1.7.0 COC1C(C(OC1n2cnc3c2ncnc3N)COP(=O)(O)O)O
InChI InChI 1.03 InChI=1S/C11H16N5O7P/c1-21-8-7(17)5(2-22-24(18,19)20)23-11(8)16-4-15-6-9(12)13-3-14-10(6)16/h3-5,7-8,11,17H,2H2,1H3,(H2,12,13,14)(H2,18,19,20)/t5-,7-,8-,11-/m1/s1
InChIKey InChI 1.03 TVGFEBXIZUYVFR-IOSLPCCCSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL1229561
PubChem 161605
ChEBI 40460
SureChEMBL SCHEMBL599965