Structural Complex
Chemical ID: NDX
IUPAC Name: [[(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S},3~{a}~{S},3~{b}~{S},5~{a}~{R},8~{S},9~{a}~{R},9~{b}~{S},11~{a}~{S})-1-(~{tert}-butylcarbamoyl)-9~{a},11~{a}-dimethyl-7-oxidanylidene-1,2,3,3~{a},3~{b},4,5,5~{a},6,8,9,9~{b},10,11-tetradecahydroindeno[5,4-f]quinolin-8-yl]-3-aminocarbonyl-4~{H}-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1N[C@@H]2CC[C@H]3[C@@H]4CCCC4CC[C@@H]3C2C[C@H]1C1C=CN([C@H]2CC[C@@H](CO[PH](=O)O[PH](=O)OC[C@@H]3CC[C@H](n4cnc5cncnc54)O3)O2)C=C1
InChI: InChI=1S/C36H50N6O8P2/c43-36-29(16-30-28-7-4-22-2-1-3-26(22)27(28)8-9-31(30)40-36)23-12-14-41(15-13-23)33-10-5-24(48-33)18-46-51(44)50-52(45)47-19-25-6-11-34(49-25)42-21-39-32-17-37-20-38-35(32)42/h12-15,17,20-31,33-34,51-52H,1-11,16,18-19H2,(H,40,43)/t22-,24-,25-,26+,27-,28-,29-,30+,31+,33+,34+/m0/s1
InChI Key: UBFTYSNHJSRQPW-LWISRDBZSA-N
Physiochemical Descriptor:
Formula: C44 H66 N9 O19 P3
Molecular weight: 1117.965
Hydrogen Bond Acceptor: 25
Hydrogen Bond Donor: 11
Rotatable Bonds: 25
Heavy Atoms: 75
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S},3~{a}~{S},3~{b}~{S},5~{a}~{R},8~{S},9~{a}~{R},9~{b}~{S},11~{a}~{S})-1-(~{tert}-butylcarbamoyl)-9~{a},11~{a}-dimethyl-7-oxidanylidene-1,2,3,3~{a},3~{b},4,5,5~{a},6,8,9,9~{b},10,11-tetradecahydroindeno[5,4-f]quinolin-8-yl]-3-aminocarbonyl-4~{H}-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.03 InChI=1S/C44H66N9O19P3/c1-42(2,3)51-39(59)26-8-7-24-21-6-9-29-44(5,25(21)10-12-43(24,26)4)14-22(38(58)50-29)20-11-13-52(15-23(20)36(46)57)40-33(56)31(54)27(69-40)16-67-74(63,64)72-75(65,66)68-17-28-32(55)34(71-73(60,61)62)41(70-28)53-19-49-30-35(45)47-18-48-37(30)53/h11,13,15,18-22,24-29,31-34,40-41,54-56H,6-10,12,14,16-17H2,1-5H3,(H2,46,57)(H,50,58)(H,51,59)(H,63,64)(H,65,66)(H2,45,47,48)(H2,60,61,62)/t20-,21+,22+,24+,25+,26-,27-,28-,29-,31-,32-,33-,34-,40-,41-,43+,44-/m1/s1
InChIKey InChI 1.03 SBPCUEDRMWGINQ-DAPYLVMHSA-N
SMILES_CANONICAL CACTVS 3.385 CC(C)(C)NC(=O)[C@H]1CC[C@H]2[C@@H]3CC[C@H]4NC(=O)[C@@H](C[C@]4(C)[C@H]3CC[C@]12C)[C@H]5C=CN(C=C5C(N)=O)[C@@H]6O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]7O[C@H]([C@H](O[P](O)(O)=O)[C@@H]7O)n8cnc9c(N)ncnc89)[C@@H](O)[C@H]6O
SMILES CACTVS 3.385 CC(C)(C)NC(=O)[CH]1CC[CH]2[CH]3CC[CH]4NC(=O)[CH](C[C]4(C)[CH]3CC[C]12C)[CH]5C=CN(C=C5C(N)=O)[CH]6O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]7O[CH]([CH](O[P](O)(O)=O)[CH]7O)n8cnc9c(N)ncnc89)[CH](O)[CH]6O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C[C@]12CC[C@H]3[C@H]([C@@H]1CC[C@@H]2C(=O)NC(C)(C)C)CC[C@@H]4[C@@]3(C[C@H](C(=O)N4)C5C=CN(C=C5C(=O)N)[C@H]6[C@@H]([C@@H]([C@H](O6)COP(=O)(O)OP(=O)(O)OC[C@@H]7[C@H]([C@H]([C@@H](O7)n8cnc9c8ncnc9N)OP(=O)(O)O)O)O)O)C
SMILES OpenEye OEToolkits 2.0.7 CC12CCC3C(C1CCC2C(=O)NC(C)(C)C)CCC4C3(CC(C(=O)N4)C5C=CN(C=C5C(=O)N)C6C(C(C(O6)COP(=O)(O)OP(=O)(O)OCC7C(C(C(O7)n8cnc9c8ncnc9N)OP(=O)(O)O)O)O)O)C
Chemical Database Mapping
Database Reference ID
PubChem 146681428