Structural Complex
Chemical ID: A5O
IUPAC Name: ADENINE ARABINOSE-5'-PHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1
InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula: C10 H14 N5 O7 P
Molecular weight: 347.221
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 5
Rotatable Bonds: 9
Heavy Atoms: 23
Systematic name
Program Version Descriptor
ACDLabs 11.02 9-(5-O-phosphono-beta-D-arabinofuranosyl)-9H-purin-6-amine
OpenEye OEToolkits 1.6.1 [(2R,3S,4S,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 11.02 O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
SMILES_CANONICAL CACTVS 3.352 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3O
SMILES CACTVS 3.352 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
SMILES OpenEye OEToolkits 1.7.0 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
InChI InChI 1.03 InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7+,10-/m1/s1
InChIKey InChI 1.03 UDMBCSSLTHHNCD-UHTZMRCNSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL1230732
PubChem 34768
ZINC ZINC000002126310
SureChEMBL SCHEMBL144996