Structural Complex
Chemical ID: NKD
IUPAC Name: (2~{S})-2-[[(2~{S})-1-[[(2~{S},3~{S})-3-[[(2~{S})-2-azanyl-3-(3-hydroxyphenyl)propanoyl]-methyl-amino]-1-[[(~{Z})-[(3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-ylidene]methyl]amino]-1-oxidanylidene-butan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]carbamoylamino]-3-(3-hydroxyphenyl)propanoic acid
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(CCc1ccccc1)NC[C@H](NC(=O)CNC(=O)NCCc1ccccc1)C(=O)N/C=C1/CC[C@H](n2ccc(=O)[nH]c2=O)O1
InChI: InChI=1S/C32H37N7O7/c40-26(13-11-22-7-3-1-4-8-22)34-20-25(37-28(42)21-36-31(44)33-17-15-23-9-5-2-6-10-23)30(43)35-19-24-12-14-29(46-24)39-18-16-27(41)38-32(39)45/h1-10,16,18-19,25,29H,11-15,17,20-21H2,(H,34,40)(H,35,43)(H,37,42)(H2,33,36,44)(H,38,41,45)/b24-19-/t25-,29+/m0/s1
InChI Key: QVHZBGGIZKRJAI-LKAGRSDFSA-N
Physiochemical Descriptor:
Formula: C38 H48 N8 O13 S
Molecular weight: 856.899
Hydrogen Bond Acceptor: 16
Hydrogen Bond Donor: 11
Rotatable Bonds: 26
Heavy Atoms: 60
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 (2~{S})-2-[[(2~{S})-1-[[(2~{S},3~{S})-3-[[(2~{S})-2-azanyl-3-(3-hydroxyphenyl)propanoyl]-methyl-amino]-1-[[(~{Z})-[(3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-ylidene]methyl]amino]-1-oxidanylidene-butan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]carbamoylamino]-3-(3-hydroxyphenyl)propanoic acid
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.03 InChI=1S/C38H48N8O13S/c1-19(45(2)34(54)24(39)16-20-6-4-8-22(47)14-20)29(33(53)40-18-27-30(50)31(51)35(59-27)46-12-10-28(49)43-38(46)58)44-32(52)25(11-13-60-3)41-37(57)42-26(36(55)56)17-21-7-5-9-23(48)15-21/h4-10,12,14-15,18-19,24-26,29-31,35,47-48,50-51H,11,13,16-17,39H2,1-3H3,(H,40,53)(H,44,52)(H,55,56)(H2,41,42,57)(H,43,49,58)/b27-18-/t19-,24-,25-,26-,29-,30+,31+,35+/m0/s1
InChIKey InChI 1.03 FPCKAOGINMZAIN-MNATZBQSSA-N
SMILES_CANONICAL CACTVS 3.385 CSCC[C@H](NC(=O)N[C@@H](Cc1cccc(O)c1)C(O)=O)C(=O)N[C@@H]([C@H](C)N(C)C(=O)[C@@H](N)Cc2cccc(O)c2)C(=O)N\C=C\3O[C@H]([C@H](O)[C@@H]\3O)N4C=CC(=O)NC4=O
SMILES CACTVS 3.385 CSCC[CH](NC(=O)N[CH](Cc1cccc(O)c1)C(O)=O)C(=O)N[CH]([CH](C)N(C)C(=O)[CH](N)Cc2cccc(O)c2)C(=O)NC=C3O[CH]([CH](O)[CH]3O)N4C=CC(=O)NC4=O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C[C@@H]([C@@H](C(=O)N/C=C\1/[C@H]([C@H]([C@@H](O1)N2C=CC(=O)NC2=O)O)O)NC(=O)[C@H](CCSC)NC(=O)N[C@@H](Cc3cccc(c3)O)C(=O)O)N(C)C(=O)[C@H](Cc4cccc(c4)O)N
SMILES OpenEye OEToolkits 2.0.7 CC(C(C(=O)NC=C1C(C(C(O1)N2C=CC(=O)NC2=O)O)O)NC(=O)C(CCSC)NC(=O)NC(Cc3cccc(c3)O)C(=O)O)N(C)C(=O)C(Cc4cccc(c4)O)N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL4756360
PubChem 138454921