Structural Complex
Chemical ID: LRP
IUPAC Name: 2-amino-9-[(2R,3R,4S,5R)-5-({[(R)-{[(S)-{[(R)-({(2R,3R,4R,5R)-5-[6-(dimethylamino)-9H-purin-9-yl]-3-hydroxy-4-methoxytetrahydrofuran-2-yl}methoxy)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxytetrahydrofuran-2-yl]-7-methyl-6-oxo-6,9-dihydro-1H-purin-7-ium
Formal Charge: 1
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1[nH+]cn2[C@H]1CC[C@@H](CO[PH](=O)O[PH](=O)O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4cncnc43)O2)O1
InChI: InChI=1S/C20H25N8O10P3/c29-20-17-19(23-9-24-20)28(11-26-17)16-4-2-13(36-16)7-34-40(31)38-41(32)37-39(30)33-6-12-1-3-15(35-12)27-10-25-14-5-21-8-22-18(14)27/h5,8-13,15-16,39-41H,1-4,6-7H2,(H,23,24,29)/p+1/t12-,13-,15+,16+/m0/s1
InChI Key: REUUNXQVQYGAFY-WMHQRMGPSA-O
Physiochemical Descriptor:
Formula: C24 H36 N10 O17 P3
Molecular weight: 829.521
Hydrogen Bond Acceptor: 25
Hydrogen Bond Donor: 8
Rotatable Bonds: 25
Heavy Atoms: 54
Systematic name
Program Version Descriptor
ACDLabs 12.01 2-amino-9-[(2R,3R,4S,5R)-5-({[(R)-{[(S)-{[(R)-({(2R,3R,4R,5R)-5-[6-(dimethylamino)-9H-purin-9-yl]-3-hydroxy-4-methoxytetrahydrofuran-2-yl}methoxy)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxytetrahydrofuran-2-yl]-7-methyl-6-oxo-6,9-dihydro-1H-purin-7-ium (non-preferred name)
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{R},4~{R},5~{R})-5-[6-(dimethylamino)purin-9-yl]-4-methoxy-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 n2c1c(ncnc1N(C)C)n(c2)C6OC(COP(=O)(O)OP(OP(O)(OCC3C(O)C(C(O3)n5c4N=C(N)NC(c4[n+](c5)C)=O)O)=O)(O)=O)C(C6OC)O
InChI InChI 1.03 InChI=1S/C24H35N10O17P3/c1-31(2)18-12-19(27-7-26-18)33(8-28-12)23-17(45-4)15(36)11(49-23)6-47-53(41,42)51-54(43,44)50-52(39,40)46-5-10-14(35)16(37)22(48-10)34-9-32(3)13-20(34)29-24(25)30-21(13)38/h7-11,14-17,22-23,35-37H,5-6H2,1-4H3,(H5-,25,29,30,38,39,40,41,42,43,44)/p+1/t10-,11-,14-,15-,16-,17-,22-,23-/m1/s1
InChIKey InChI 1.03 WWIREDRDOBXWDG-FRZFILDFSA-O
SMILES_CANONICAL CACTVS 3.385 CO[C@@H]1[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3c[n+](C)c4C(=O)NC(=Nc34)N)O[C@H]1n5cnc6c(ncnc56)N(C)C
SMILES CACTVS 3.385 CO[CH]1[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3c[n+](C)c4C(=O)NC(=Nc34)N)O[CH]1n5cnc6c(ncnc56)N(C)C
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C[n+]1cn(c2c1C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N(C)C)OC)O)O)O
SMILES OpenEye OEToolkits 2.0.7 C[n+]1cn(c2c1C(=O)NC(=N2)N)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N(C)C)OC)O)O)O
Chemical Database Mapping
Database Reference ID
PubChem 138105969