Structural Complex
Chemical ID: KXM
IUPAC Name: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4R)-5-[(4aR)-7,8-dimethyl-2,4-dioxo-5-(2-phenylethyl)-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1N=C2[C@H](C(=O)N1)N(CCc1ccccc1)c1ccccc1N2CCCCCO[PH](=O)O[PH](=O)OC[C@@H]1CC[C@H](n2cnc3cncnc32)O1
InChI: InChI=1S/C33H38N8O8P2/c42-32-29-31(37-33(43)38-32)40(27-12-6-5-11-26(27)39(29)17-15-23-9-3-1-4-10-23)16-7-2-8-18-46-50(44)49-51(45)47-20-24-13-14-28(48-24)41-22-36-25-19-34-21-35-30(25)41/h1,3-6,9-12,19,21-22,24,28-29,50-51H,2,7-8,13-18,20H2,(H,38,42,43)/t24-,28+,29+/m0/s1
InChI Key: LWFLFXIKVRAKBV-TUMTZTIRSA-N
Physiochemical Descriptor:
Formula: C35 H43 N9 O15 P2
Molecular weight: 891.715
Hydrogen Bond Acceptor: 22
Hydrogen Bond Donor: 9
Rotatable Bonds: 26
Heavy Atoms: 61
Systematic name
Program Version Descriptor
ACDLabs 12.01 [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4R)-5-[(4aR)-7,8-dimethyl-2,4-dioxo-5-(2-phenylethyl)-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{R},4~{R})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-5-(2-phenylethyl)-4~{a}~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentoxy]-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 c14cc(c(cc1N(CCc2ccccc2)C3C(NC(N=C3N4CC(O)C(C(O)COP(O)(=O)OP(=O)(O)OCC7C(C(C(n6cnc5c(ncnc56)N)O7)O)O)O)=O)=O)C)C
InChI InChI 1.03 InChI=1S/C35H43N9O15P2/c1-17-10-20-21(11-18(17)2)43(32-26(33(50)41-35(51)40-32)42(20)9-8-19-6-4-3-5-7-19)12-22(45)27(47)23(46)13-56-60(52,53)59-61(54,55)57-14-24-28(48)29(49)34(58-24)44-16-39-25-30(36)37-15-38-31(25)44/h3-7,10-11,15-16,22-24,26-29,34,45-49H,8-9,12-14H2,1-2H3,(H,52,53)(H,54,55)(H2,36,37,38)(H,41,50,51)/t22-,23-,24-,26-,27-,28-,29-,34-/m1/s1
InChIKey InChI 1.03 IGCDLEVMDDLVJB-TUIVOLRASA-N
SMILES_CANONICAL CACTVS 3.385 Cc1cc2N(CCc3ccccc3)[C@H]4C(=O)NC(=O)N=C4N(C[C@@H](O)[C@@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)n6cnc7c(N)ncnc67)c2cc1C
SMILES CACTVS 3.385 Cc1cc2N(CCc3ccccc3)[CH]4C(=O)NC(=O)N=C4N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)n6cnc7c(N)ncnc67)c2cc1C
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)[C@@H]3N2CCc4ccccc4)C[C@H]([C@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)O)O)O)O
SMILES OpenEye OEToolkits 2.0.7 Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3N2CCc4ccccc4)CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O
Chemical Database Mapping
Database Reference ID
PubChem 138455176