Structural Complex
Chemical ID: 2O2
IUPAC Name: 1-{2-deoxy-3,5-O-[phenyl(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-[(E)-2-phosphonoethenyl]pyrimidine-2,4(1H,3H)-dione
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2C[C@H]3OC(c4ccccc4)OC[C@H]3O2)c(=O)[nH]1
InChI: InChI=1S/C16H16N2O5/c19-13-6-7-18(16(20)17-13)14-8-11-12(22-14)9-21-15(23-11)10-4-2-1-3-5-10/h1-7,11-12,14-15H,8-9H2,(H,17,19,20)/t11-,12-,14-,15+/m1/s1
InChI Key: DPMDRGKDJLBCRC-GBOPCIDUSA-N
Physiochemical Descriptor:
Formula: C18 H20 N2 O11 P2
Molecular weight: 502.306
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 5
Rotatable Bonds: 9
Heavy Atoms: 33
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-{2-deoxy-3,5-O-[phenyl(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-[(E)-2-phosphonoethenyl]pyrimidine-2,4(1H,3H)-dione
OpenEye OEToolkits 1.7.6 [(2R,4aR,6R,7aR)-6-[2,4-bis(oxidanylidene)-5-[(E)-2-phosphonoethenyl]pyrimidin-1-yl]-2-phenyl-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3]dioxin-2-yl]phosphonic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(O)/C=C/C1=CN(C(=O)NC1=O)C4OC2C(OC(OC2)(c3ccccc3)P(=O)(O)O)C4
InChI InChI 1.03 InChI=1S/C18H20N2O11P2/c21-16-11(6-7-32(23,24)25)9-20(17(22)19-16)15-8-13-14(30-15)10-29-18(31-13,33(26,27)28)12-4-2-1-3-5-12/h1-7,9,13-15H,8,10H2,(H,19,21,22)(H2,23,24,25)(H2,26,27,28)/b7-6+/t13-,14-,15-,18-/m1/s1
InChIKey InChI 1.03 AYSYVLQGVXZPIY-OAIWFRFLSA-N
SMILES_CANONICAL CACTVS 3.385 O[P](O)(=O)/C=C/C1=CN([C@H]2C[C@H]3O[C@](OC[C@H]3O2)(c4ccccc4)[P](O)(O)=O)C(=O)NC1=O
SMILES CACTVS 3.385 O[P](O)(=O)C=CC1=CN([CH]2C[CH]3O[C](OC[CH]3O2)(c4ccccc4)[P](O)(O)=O)C(=O)NC1=O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 c1ccc(cc1)[C@]2(OC[C@@H]3[C@H](O2)C[C@@H](O3)N4C=C(C(=O)NC4=O)/C=C/P(=O)(O)O)P(=O)(O)O
SMILES OpenEye OEToolkits 1.7.6 c1ccc(cc1)C2(OCC3C(O2)CC(O3)N4C=C(C(=O)NC4=O)C=CP(=O)(O)O)P(=O)(O)O
Chemical Database Mapping
Database Reference ID
PubChem 137348071
ZINC ZINC000263620255