ISDA: 6FM4

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: 5UA

IUPAC Name: 5'-O-CARBOXY-2'-DEOXYADENOSINE

Formal Charge: 0

Type: DNA LINKING

Substructure

Substruture Type: MurckoScaffold

SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1

InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1

InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N

Physiochemical Descriptor:

Formula: C11 H13 N5 O5

Molecular weight: 295.251

Hydrogen Bond Acceptor: 10

Hydrogen Bond Donor: 3

Rotatable Bonds: 5

Heavy Atoms: 21

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	5'-O-carboxy-2'-deoxyadenosine
OpenEye OEToolkits	1.6.1	[(2R,3S,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-oxolan-2-yl]methyl hydrogen carbonate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C(O)OCC3OC(n2cnc1c(ncnc12)N)CC3O
SMILES_CANONICAL	CACTVS	3.352	Nc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](COC(O)=O)O3
SMILES	CACTVS	3.352	Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](COC(O)=O)O3
SMILES_CANONICAL	OpenEye OEToolkits	1.6.1	c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COC(=O)O)O)N
SMILES	OpenEye OEToolkits	1.6.1	c1nc(c2c(n1)n(cn2)C3CC(C(O3)COC(=O)O)O)N
InChI	InChI	1.03	InChI=1S/C11H13N5O5/c12-9-8-10(14-3-13-9)16(4-15-8)7-1-5(17)6(21-7)2-20-11(18)19/h3-7,17H,1-2H2,(H,18,19)(H2,12,13,14)/t5-,6+,7+/m0/s1
InChIKey	InChI	1.03	YSFXGKUPZLTGKR-RRKCRQDMSA-N

Chemical Database Mapping

Database	Reference ID
PubChem	49866542
ZINC	ZINC000058627061