Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Virus Classification
Indian Data
Documentation
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Maintenance Mode:
Some services may turn out to be unavailable. We apologize for the inconvenience!
Summary
Structure Feature
Experiment
Ligands & Environment
5AGD
pdb_00005agd
10.2210/pdb5agd/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
MAN
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
MAN
IUPAC Name:
alpha-D-mannopyranose
Formal Charge:
0
Type:
D-saccharide, alpha linking
Substructure
Substruture Type:
MurckoScaffold
SMILES:
C1CCOCC1
InChI:
InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key:
DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula:
C6 H12 O6
Molecular weight:
180.156
Hydrogen Bond Acceptor:
6
Hydrogen Bond Donor:
5
Rotatable Bonds:
6
Heavy Atoms:
12
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
alpha-D-mannopyranose
OpenEye OEToolkits
1.5.0
(2S,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
GMML
1.0
DManpa
GMML
1.0
a-D-mannopyranose
PDB-CARE
1.0
a-D-Manp
GMML
1.0
Man
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
OC1C(O)C(OC(O)C1O)CO
SMILES_CANONICAL
CACTVS
3.341
OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
SMILES
CACTVS
3.341
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
SMILES_CANONICAL
OpenEye OEToolkits
1.5.0
C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
SMILES
OpenEye OEToolkits
1.5.0
C(C1C(C(C(C(O1)O)O)O)O)O
InChI
InChI
1.03
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
InChIKey
InChI
1.03
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Chemical Database Mapping
Database
Reference ID
ChEMBL
CHEMBL365590
PubChem
185698
ChEBI
28729
ZINC
ZINC000003860903
SureChEMBL
SCHEMBL76882
HMDB
HMDB0000169
Feedback
Feedback Form
Name
Email
Institute
Feedback
Submit