Structural Complex
Chemical ID: 4L1
IUPAC Name: 5-(4-methylpiperazin-1-yl)-2'-(pyridin-2-yl)-1H,1'H-2,5'-bibenzimidazole
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc(-c2nc3cc(-c4nc5cc(N6CCNCC6)ccc5[nH]4)ccc3[nH]2)nc1
InChI: InChI=1S/C23H21N7/c1-2-8-25-19(3-1)23-27-17-6-4-15(13-20(17)29-23)22-26-18-7-5-16(14-21(18)28-22)30-11-9-24-10-12-30/h1-8,13-14,24H,9-12H2,(H,26,28)(H,27,29)
InChI Key: QLUGOYAMQIFMSZ-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C24 H23 N7
Molecular weight: 409.486
Hydrogen Bond Acceptor: 5
Hydrogen Bond Donor: 2
Rotatable Bonds: 4
Heavy Atoms: 31
Systematic name
Program Version Descriptor
ACDLabs 12.01 5-(4-methylpiperazin-1-yl)-2'-(pyridin-2-yl)-1H,1'H-2,5'-bibenzimidazole
OpenEye OEToolkits 1.9.2 5-(4-methylpiperazin-1-yl)-2-(2-pyridin-2-yl-1H-benzimidazol-5-yl)-1H-benzimidazole
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 C1N(CCN(C1)C)c2ccc3nc(nc3c2)c4cc5c(cc4)nc(n5)c6ncccc6
InChI InChI 1.03 InChI=1S/C24H23N7/c1-30-10-12-31(13-11-30)17-6-8-19-22(15-17)28-23(26-19)16-5-7-18-21(14-16)29-24(27-18)20-4-2-3-9-25-20/h2-9,14-15H,10-13H2,1H3,(H,26,28)(H,27,29)
InChIKey InChI 1.03 QLJMJDOZNAQXQQ-UHFFFAOYSA-N
SMILES_CANONICAL CACTVS 3.385 CN1CCN(CC1)c2ccc3[nH]c(nc3c2)c4ccc5[nH]c(nc5c4)c6ccccn6
SMILES CACTVS 3.385 CN1CCN(CC1)c2ccc3[nH]c(nc3c2)c4ccc5[nH]c(nc5c4)c6ccccn6
SMILES_CANONICAL OpenEye OEToolkits 1.9.2 CN1CCN(CC1)c2ccc3c(c2)nc([nH]3)c4ccc5c(c4)nc([nH]5)c6ccccn6
SMILES OpenEye OEToolkits 1.9.2 CN1CCN(CC1)c2ccc3c(c2)nc([nH]3)c4ccc5c(c4)nc([nH]5)c6ccccn6
Chemical Database Mapping
Database Reference ID
PubChem 53476513
ZINC ZINC000072317517
SureChEMBL SCHEMBL14892245
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