Structural Complex
Chemical ID: D69
IUPAC Name: [[(2R,3S,4S)-5-[(4aS,10aS)-4a-[(1S)-3-azanylidene-1,4-diphenyl-butyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-5,10a-dihydro-1H-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentoxy]-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: N=C(Cc1ccccc1)C[C@@H](c1ccccc1)[C@]12Nc3ccccc3N(CCCCCO[PH](=O)O[PH](=O)OC[C@@H]3CC[C@H](n4cnc5cncnc54)O3)[C@@H]1NC(=O)NC2=O
InChI: InChI=1S/C41H47N9O8P2/c42-30(22-28-12-4-1-5-13-28)23-32(29-14-6-2-7-15-29)41-38(46-40(52)47-39(41)51)49(35-17-9-8-16-33(35)48-41)20-10-3-11-21-55-59(53)58-60(54)56-25-31-18-19-36(57-31)50-27-45-34-24-43-26-44-37(34)50/h1-2,4-9,12-17,24,26-27,31-32,36,38,42,48,59-60H,3,10-11,18-23,25H2,(H2,46,47,51,52)/t31-,32-,36+,38-,41-/m0/s1
InChI Key: LNYZQQFVGCZNQK-SCLPDQNZSA-N
Physiochemical Descriptor:
Formula: C43 H52 N10 O15 P2
Molecular weight: 1010.879
Hydrogen Bond Acceptor: 23
Hydrogen Bond Donor: 12
Rotatable Bonds: 29
Heavy Atoms: 70
Systematic name
Program Version Descriptor
ACDLabs 12.01 [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-2,3,4-trihydroxy-5-[(4aS,10aS)-4a-[(1S,3Z)-3-imino-1,4-diphenylbutyl]-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]pentyl dihydrogen diphosphate (non-preferred name)
OpenEye OEToolkits 1.7.6 [[(2R,3S,4S)-5-[(4aS,10aS)-4a-[(1S)-3-azanylidene-1,4-diphenyl-butyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-5,10a-dihydro-1H-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentoxy]-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C2NC(=O)NC5N(c1cc(c(cc1NC25C(c3ccccc3)CC(=[N@H])Cc4ccccc4)C)C)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC8OC(n7cnc6c(ncnc67)N)C(O)C8O
InChI InChI 1.03 InChI=1S/C43H52N10O15P2/c1-22-13-28-29(14-23(22)2)52(40-43(51-28,41(59)50-42(60)49-40)27(25-11-7-4-8-12-25)16-26(44)15-24-9-5-3-6-10-24)17-30(54)34(56)31(55)18-65-69(61,62)68-70(63,64)66-19-32-35(57)36(58)39(67-32)53-21-48-33-37(45)46-20-47-38(33)53/h3-14,20-21,27,30-32,34-36,39-40,44,51,54-58H,15-19H2,1-2H3,(H,61,62)(H,63,64)(H2,45,46,47)(H2,49,50,59,60)/b44-26+/t27-,30-,31+,32+,34-,35+,36+,39+,40-,43-/m0/s1
InChIKey InChI 1.03 JMWCGSVEJNOEAG-BEOGYRSYSA-N
SMILES_CANONICAL CACTVS 3.385 Cc1cc2N[C@@]3([C@@H](CC(=N)Cc4ccccc4)c5ccccc5)[C@@H](NC(=O)NC3=O)N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]6O[C@H]([C@H](O)[C@@H]6O)n7cnc8c(N)ncnc78)c2cc1C
SMILES CACTVS 3.385 Cc1cc2N[C]3([CH](CC(=N)Cc4ccccc4)c5ccccc5)[CH](NC(=O)NC3=O)N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]6O[CH]([CH](O)[CH]6O)n7cnc8c(N)ncnc78)c2cc1C
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 [H]/N=C(\Cc1ccccc1)/C[C@@H](c2ccccc2)[C@]34[C@@H](NC(=O)NC3=O)N(c5cc(c(cc5N4)C)C)C[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]6[C@H]([C@H]([C@@H](O6)n7cnc8c7ncnc8N)O)O)O)O)O
SMILES OpenEye OEToolkits 1.7.6 Cc1cc2c(cc1C)N(C3C(N2)(C(=O)NC(=O)N3)C(CC(=N)Cc4ccccc4)c5ccccc5)CC(C(C(COP(=O)(O)OP(=O)(O)OCC6C(C(C(O6)n7cnc8c7ncnc8N)O)O)O)O)O