Structural Complex
Chemical ID: 3GN
IUPAC Name: 2-[(2S)-2-methylpyrrolidin-2-yl]-1H-benzimidazole-7-carboxamide
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2[nH]c(C3CCCN3)nc2c1
InChI: InChI=1S/C11H13N3/c1-2-5-9-8(4-1)13-11(14-9)10-6-3-7-12-10/h1-2,4-5,10,12H,3,6-7H2,(H,13,14)
InChI Key: FHGVBMUGKDNVNB-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C13 H16 N4 O
Molecular weight: 244.292
Hydrogen Bond Acceptor: 3
Hydrogen Bond Donor: 3
Rotatable Bonds: 3
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 10.04 2-[(2S)-2-methylpyrrolidin-2-yl]-1H-benzimidazole-7-carboxamide
OpenEye OEToolkits 1.5.0 2-[(2S)-2-methylpyrrolidin-2-yl]-3H-benzimidazole-4-carboxamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(N)c3c1c(nc(n1)C2(NCCC2)C)ccc3
SMILES_CANONICAL CACTVS 3.341 C[C@]1(CCCN1)c2[nH]c3c(cccc3C(N)=O)n2
SMILES CACTVS 3.341 C[C]1(CCCN1)c2[nH]c3c(cccc3C(N)=O)n2
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C[C@]1(CCCN1)c2[nH]c3c(cccc3n2)C(=O)N
SMILES OpenEye OEToolkits 1.5.0 CC1(CCCN1)c2[nH]c3c(cccc3n2)C(=O)N
InChI InChI 1.03 InChI=1S/C13H16N4O/c1-13(6-3-7-15-13)12-16-9-5-2-4-8(11(14)18)10(9)17-12/h2,4-5,15H,3,6-7H2,1H3,(H2,14,18)(H,16,17)/t13-/m0/s1
InChIKey InChI 1.03 JNAHVYVRKWKWKQ-ZDUSSCGKSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL497608
PubChem 11842604
ZINC ZINC000036470974
SureChEMBL SCHEMBL422319