Structural Complex
Chemical ID: 3BG
IUPAC Name: 1-(4-{4-[(1H-benzimidazol-2-ylmethyl)amino]-6-(4,5-dimethoxy-2-methylphenoxy)pyrimidin-2-yl}piperazin-1-yl)ethanone
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc(Oc2cc(NCc3nc4ccccc4[nH]3)nc(N3CCNCC3)n2)cc1
InChI: InChI=1S/C22H23N7O/c1-2-6-16(7-3-1)30-21-14-19(27-22(28-21)29-12-10-23-11-13-29)24-15-20-25-17-8-4-5-9-18(17)26-20/h1-9,14,23H,10-13,15H2,(H,25,26)(H,24,27,28)
InChI Key: WPDUMPVGRNGGEW-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C27 H31 N7 O4
Molecular weight: 517.580
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 2
Rotatable Bonds: 12
Heavy Atoms: 38
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-(4-{4-[(1H-benzimidazol-2-ylmethyl)amino]-6-(4,5-dimethoxy-2-methylphenoxy)pyrimidin-2-yl}piperazin-1-yl)ethanone
OpenEye OEToolkits 1.7.6 1-[4-[4-(1H-benzimidazol-2-ylmethylamino)-6-(4,5-dimethoxy-2-methyl-phenoxy)pyrimidin-2-yl]piperazin-1-yl]ethanone
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(N5CCN(c4nc(NCc2nc1ccccc1n2)cc(Oc3cc(OC)c(OC)cc3C)n4)CC5)C
InChI InChI 1.03 InChI=1S/C27H31N7O4/c1-17-13-22(36-3)23(37-4)14-21(17)38-26-15-24(28-16-25-29-19-7-5-6-8-20(19)30-25)31-27(32-26)34-11-9-33(10-12-34)18(2)35/h5-8,13-15H,9-12,16H2,1-4H3,(H,29,30)(H,28,31,32)
InChIKey InChI 1.03 QDJWEGQUTGIBNS-UHFFFAOYSA-N
SMILES_CANONICAL CACTVS 3.385 COc1cc(C)c(Oc2cc(NCc3[nH]c4ccccc4n3)nc(n2)N5CCN(CC5)C(C)=O)cc1OC
SMILES CACTVS 3.385 COc1cc(C)c(Oc2cc(NCc3[nH]c4ccccc4n3)nc(n2)N5CCN(CC5)C(C)=O)cc1OC
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 Cc1cc(c(cc1Oc2cc(nc(n2)N3CCN(CC3)C(=O)C)NCc4[nH]c5ccccc5n4)OC)OC
SMILES OpenEye OEToolkits 1.7.6 Cc1cc(c(cc1Oc2cc(nc(n2)N3CCN(CC3)C(=O)C)NCc4[nH]c5ccccc5n4)OC)OC
Chemical Database Mapping
Database Reference ID
PubChem 91824251
ZINC ZINC000263620926