Structural Complex
Chemical ID: 883
IUPAC Name: 1-ethyl-3-[5-(5-fluoropyridin-3-yl)-7-(pyrimidin-2-yl)-1H-benzimidazol-2-yl]urea
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1cnc(-c2cc(-c3cccnc3)cc3nc[nH]c23)nc1
InChI: InChI=1S/C16H11N5/c1-3-11(9-17-4-1)12-7-13(16-18-5-2-6-19-16)15-14(8-12)20-10-21-15/h1-10H,(H,20,21)
InChI Key: VKBWDYNDEIYYLC-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C19 H16 F N7 O
Molecular weight: 377.375
Hydrogen Bond Acceptor: 5
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 28
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-ethyl-3-[5-(5-fluoropyridin-3-yl)-7-(pyrimidin-2-yl)-1H-benzimidazol-2-yl]urea
OpenEye OEToolkits 1.9.2 1-ethyl-3-[5-(5-fluoranylpyridin-3-yl)-7-pyrimidin-2-yl-1H-benzimidazol-2-yl]urea
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 Fc4cc(c1cc3nc(NC(=O)NCC)nc3c(c1)c2ncccn2)cnc4
InChI InChI 1.03 InChI=1S/C19H16FN7O/c1-2-22-19(28)27-18-25-15-8-11(12-6-13(20)10-21-9-12)7-14(16(15)26-18)17-23-4-3-5-24-17/h3-10H,2H2,1H3,(H3,22,25,26,27,28)
InChIKey InChI 1.03 FKCGKEHVIVGGDU-UHFFFAOYSA-N
SMILES_CANONICAL CACTVS 3.385 CCNC(=O)Nc1[nH]c2c(cc(cc2c3ncccn3)c4cncc(F)c4)n1
SMILES CACTVS 3.385 CCNC(=O)Nc1[nH]c2c(cc(cc2c3ncccn3)c4cncc(F)c4)n1
SMILES_CANONICAL OpenEye OEToolkits 1.9.2 CCNC(=O)Nc1[nH]c2c(cc(cc2n1)c3cc(cnc3)F)c4ncccn4
SMILES OpenEye OEToolkits 1.9.2 CCNC(=O)Nc1[nH]c2c(cc(cc2n1)c3cc(cnc3)F)c4ncccn4
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL3356986
PubChem 11494578
ZINC ZINC000102265291
SureChEMBL SCHEMBL2935572