Structural Complex
Chemical ID: EDV
IUPAC Name: 1-(2-deoxy-2-methyl-beta-D-arabinofuranosyl)-5-ethynylpyrimidine-2,4(1H,3H)-dione
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2CCCO2)c(=O)[nH]1
InChI: InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1
InChI Key: CWWIKVUHBBTKHC-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C12 H14 N2 O5
Molecular weight: 266.250
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 19
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-(2-deoxy-2-methyl-beta-D-arabinofuranosyl)-5-ethynylpyrimidine-2,4(1H,3H)-dione
OpenEye OEToolkits 1.7.6 5-ethynyl-1-[(2R,3S,4S,5R)-5-(hydroxymethyl)-3-methyl-4-oxidanyl-oxolan-2-yl]pyrimidine-2,4-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1NC(=O)N(C=C1C#C)C2OC(C(O)C2C)CO
InChI InChI 1.03 InChI=1S/C12H14N2O5/c1-3-7-4-14(12(18)13-10(7)17)11-6(2)9(16)8(5-15)19-11/h1,4,6,8-9,11,15-16H,5H2,2H3,(H,13,17,18)/t6-,8+,9-,11+/m0/s1
InChIKey InChI 1.03 HBALXYGFMJGYHQ-GTQWGBSQSA-N
SMILES_CANONICAL CACTVS 3.385 C[C@H]1[C@H](O)[C@@H](CO)O[C@H]1N2C=C(C#C)C(=O)NC2=O
SMILES CACTVS 3.385 C[CH]1[CH](O)[CH](CO)O[CH]1N2C=C(C#C)C(=O)NC2=O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 C[C@H]1[C@@H]([C@H](O[C@H]1N2C=C(C(=O)NC2=O)C#C)CO)O
SMILES OpenEye OEToolkits 1.7.6 CC1C(C(OC1N2C=C(C(=O)NC2=O)C#C)CO)O
Chemical Database Mapping
Database Reference ID
PubChem 10515865
ZINC ZINC000038978815