Structural Complex
Chemical ID: EP6
IUPAC Name: 5'-[{cis-3-[2-(5-tert-butyl-1H-benzimidazol-2-yl)ethyl]cyclobutyl}(propan-2-yl)amino]-5'-deoxyadenosine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2[nH]c(CC[C@H]3C[C@@H](NC[C@@H]4CC[C@H](n5cnc6cncnc65)O4)C3)nc2c1
InChI: InChI=1S/C23H27N7O/c1-2-4-19-18(3-1)28-21(29-19)7-5-15-9-16(10-15)25-11-17-6-8-22(31-17)30-14-27-20-12-24-13-26-23(20)30/h1-4,12-17,22,25H,5-11H2,(H,28,29)/t15-,16+,17-,22+/m0/s1
InChI Key: VDCMTJHJMCOTLL-DVSDUFGPSA-N
Physiochemical Descriptor:
Formula: C30 H42 N8 O3
Molecular weight: 562.706
Hydrogen Bond Acceptor: 10
Hydrogen Bond Donor: 4
Rotatable Bonds: 13
Heavy Atoms: 41
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-[{cis-3-[2-(5-tert-butyl-1H-benzimidazol-2-yl)ethyl]cyclobutyl}(propan-2-yl)amino]-5'-deoxyadenosine
OpenEye OEToolkits 1.7.6 (2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-[[[3-[2-(5-tert-butyl-1H-benzimidazol-2-yl)ethyl]cyclobutyl]-propan-2-yl-amino]methyl]oxolane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CN(C(C)C)C6CC(CCc5nc4cc(ccc4n5)C(C)(C)C)C6)N
InChI InChI 1.03 InChI=1S/C30H42N8O3/c1-16(2)37(13-22-25(39)26(40)29(41-22)38-15-34-24-27(31)32-14-33-28(24)38)19-10-17(11-19)6-9-23-35-20-8-7-18(30(3,4)5)12-21(20)36-23/h7-8,12,14-17,19,22,25-26,29,39-40H,6,9-11,13H2,1-5H3,(H,35,36)(H2,31,32,33)/t17-,19+,22-,25-,26-,29-/m1/s1
InChIKey InChI 1.03 LXFOLMYKSYSZQS-LURJZOHASA-N
SMILES_CANONICAL CACTVS 3.370 CC(C)N(C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)[C@H]4C[C@@H](CCc5[nH]c6ccc(cc6n5)C(C)(C)C)C4
SMILES CACTVS 3.370 CC(C)N(C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)[CH]4C[CH](CCc5[nH]c6ccc(cc6n5)C(C)(C)C)C4
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC(C)N(C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)C4CC(C4)CCc5[nH]c6ccc(cc6n5)C(C)(C)C
SMILES OpenEye OEToolkits 1.7.6 CC(C)N(CC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)C4CC(C4)CCc5[nH]c6ccc(cc6n5)C(C)(C)C
Chemical Database Mapping
Database Reference ID
DrugBank DB12920
ChEMBL CHEMBL3414626
ChEBI 230493
ZINC ZINC000168212088
SureChEMBL SCHEMBL10248515