Structural Complex
Chemical ID: AI9
IUPAC Name: [(2R,3S,4S,5E)-5-[[5-azanyl-2,4-bis(oxidanylidene)-1H-pyrimidin-6-yl]imino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1cc[nH]c(=O)[nH]1
InChI: InChI=1S/C4H4N2O2/c7-3-1-2-5-4(8)6-3/h1-2H,(H2,5,6,7,8)
InChI Key: ISAKRJDGNUQOIC-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C9 H15 N4 O9 P
Molecular weight: 354.211
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 8
Rotatable Bonds: 13
Heavy Atoms: 23
Systematic name
Program Version Descriptor
ACDLabs 12.01 (2R,3S,4S,5E)-5-[(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)imino]-2,3,4-trihydroxypentyl dihydrogen phosphate (non-preferred name)
OpenEye OEToolkits 1.7.6 [(2R,3S,4S,5E)-5-[[5-azanyl-2,4-bis(oxidanylidene)-1H-pyrimidin-6-yl]imino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1NC(/N=C/C(O)C(O)C(O)COP(=O)(O)O)=C(C(=O)N1)N
InChI InChI 1.03 InChI=1S/C9H15N4O9P/c10-5-7(12-9(18)13-8(5)17)11-1-3(14)6(16)4(15)2-22-23(19,20)21/h1,3-4,6,14-16H,2,10H2,(H2,19,20,21)(H2,12,13,17,18)/b11-1+/t3-,4+,6-/m0/s1
InChIKey InChI 1.03 XKTZRTIKRCUGRX-ODDLNGBBSA-N
SMILES_CANONICAL CACTVS 3.370 NC1=C(NC(=O)NC1=O)N=C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O
SMILES CACTVS 3.370 NC1=C(NC(=O)NC1=O)N=C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 C([C@H]([C@H]([C@H](/C=N/C1=C(C(=O)NC(=O)N1)N)O)O)O)OP(=O)(O)O
SMILES OpenEye OEToolkits 1.7.6 C(C(C(C(C=NC1=C(C(=O)NC(=O)N1)N)O)O)O)OP(=O)(O)O
Chemical Database Mapping
Database Reference ID
PubChem 137348925
ZINC ZINC000098208940