ISDA: 4DVL

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: JKM

IUPAC Name: 1-[(2S,3aS,4S,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4( 1H,3H)-dione

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ccn([C@H]2OC[C@H]3O[PH](=O)O[C@@H]32)c(=O)[nH]1

InChI: InChI=1S/C8H9N2O6P/c11-5-1-2-10(8(12)9-5)7-6-4(3-14-7)15-17(13)16-6/h1-2,4,6-7,17H,3H2,(H,9,11,12)/t4-,6+,7+/m1/s1

InChI Key: KPSIDNNMRDPKBL-PIYBLCFFSA-N

Physiochemical Descriptor:

Formula: C9 H11 N2 O8 P

Molecular weight: 306.166

Hydrogen Bond Acceptor: 9

Hydrogen Bond Donor: 3

Rotatable Bonds: 4

Heavy Atoms: 20

Systematic name

Program	Version	Descriptor
ACDLabs	12.01	1-[(2S,3aS,4S,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4(1H,3H)-dione
OpenEye OEToolkits	1.7.6	1-[(2S,3aS,4S,6R,6aR)-6-(hydroxymethyl)-2-oxidanyl-2-oxidanylidene-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]pyrimidine-2,4-dione

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C1C=CN(C(=O)N1)C2OC(C3OP(=O)(O)OC23)CO
InChI	InChI	1.03	InChI=1S/C9H11N2O8P/c12-3-4-6-7(19-20(15,16)18-6)8(17-4)11-2-1-5(13)10-9(11)14/h1-2,4,6-8,12H,3H2,(H,15,16)(H,10,13,14)/t4-,6-,7+,8+/m1/s1
InChIKey	InChI	1.03	HWDMHJDYMFRXOX-GVYWOMJSSA-N
SMILES_CANONICAL	CACTVS	3.370	OC[C@H]1O[C@@H]([C@H]2O[P](O)(=O)O[C@H]12)N3C=CC(=O)NC3=O
SMILES	CACTVS	3.370	OC[CH]1O[CH]([CH]2O[P](O)(=O)O[CH]12)N3C=CC(=O)NC3=O
SMILES_CANONICAL	OpenEye OEToolkits	1.7.6	C1=CN(C(=O)NC1=O)[C@@H]2[C@@H]3[C@@H]([C@H](O2)CO)O[P@@](=O)(O3)O
SMILES	OpenEye OEToolkits	1.7.6	C1=CN(C(=O)NC1=O)C2C3C(C(O2)CO)OP(=O)(O3)O

Chemical Database Mapping

Database	Reference ID
PubChem	56965948
ZINC	ZINC000098209050