Structural Complex
Chemical ID: 3PD
IUPAC Name: 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula: C10 H14 N5 O7 P
Molecular weight: 347.221
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 5
Rotatable Bonds: 8
Heavy Atoms: 23
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-deoxy-3'-guanylic acid
OpenEye OEToolkits 1.5.0 [(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1c2ncn(c2N=C(N)N1)C3OC(C(OP(=O)(O)O)C3)CO
SMILES_CANONICAL CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O[P](O)(O)=O)[C@@H](CO)O3
SMILES CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O[P](O)(O)=O)[CH](CO)O3
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)OP(=O)(O)O)N=C(NC2=O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3CC(C(O3)CO)OP(=O)(O)O)N=C(NC2=O)N
InChI InChI 1.03 InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(5(2-16)21-6)22-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
InChIKey InChI 1.03 QQMSZHORHNORLP-KVQBGUIXSA-N
Chemical Database Mapping
Database Reference ID
PubChem 135449322
ChEBI 55553
ZINC ZINC000014963248
SureChEMBL SCHEMBL2985702