ISDA: 3URP

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: PGP

IUPAC Name: GUANOSINE-3',5'-DIPHOSPHATE

Formal Charge: 0

Type: RNA LINKING

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1

InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1

InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N

Physiochemical Descriptor:

Formula: C10 H15 N5 O11 P2

Molecular weight: 443.201

Hydrogen Bond Acceptor: 15

Hydrogen Bond Donor: 7

Rotatable Bonds: 12

Heavy Atoms: 28

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	guanosine 3',5'-bis(dihydrogen phosphate)
OpenEye OEToolkits	1.5.0	[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-hydroxy-2-(phosphonooxymethyl)oxolan-3-yl] dihydrogen phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1c2ncn(c2N=C(N)N1)C3OC(C(OP(=O)(O)O)C3O)COP(=O)(O)O
SMILES_CANONICAL	CACTVS	3.341	NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]3O
SMILES	CACTVS	3.341	NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]3O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)OP(=O)(O)O)O)N=C(NC2=O)N
SMILES	OpenEye OEToolkits	1.5.0	c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)OP(=O)(O)O)O)N=C(NC2=O)N
InChI	InChI	1.03	InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6(26-28(21,22)23)3(25-9)1-24-27(18,19)20/h2-3,5-6,9,16H,1H2,(H2,18,19,20)(H2,21,22,23)(H3,11,13,14,17)/t3-,5-,6-,9-/m1/s1
InChIKey	InChI	1.03	XYVNHPYNSPGYLI-UUOKFMHZSA-N

Chemical Database Mapping