Structural Complex
Chemical ID: DU2
IUPAC Name: 2',5'-dideoxy-5'-{[(R)-(1-methyl-1H-imidazol-2-yl)(phenyl)methyl]amino}uridine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2CC[C@@H](CNC(c3ccccc3)c3ncc[nH]3)O2)c(=O)[nH]1
InChI: InChI=1S/C19H21N5O3/c25-15-8-11-24(19(26)23-15)16-7-6-14(27-16)12-22-17(18-20-9-10-21-18)13-4-2-1-3-5-13/h1-5,8-11,14,16-17,22H,6-7,12H2,(H,20,21)(H,23,25,26)/t14-,16+,17?/m0/s1
InChI Key: KZTMQWOVXLVYLH-NOYLFRNESA-N
Physiochemical Descriptor:
Formula: C20 H23 N5 O4
Molecular weight: 397.428
Hydrogen Bond Acceptor: 8
Hydrogen Bond Donor: 3
Rotatable Bonds: 8
Heavy Atoms: 29
Systematic name
Program Version Descriptor
ACDLabs 12.01 2',5'-dideoxy-5'-{[(R)-(1-methyl-1H-imidazol-2-yl)(phenyl)methyl]amino}uridine
OpenEye OEToolkits 1.7.2 1-[(2R,4S,5R)-5-[[[(1-methylimidazol-2-yl)-phenyl-methyl]amino]methyl]-4-oxidanyl-oxolan-2-yl]pyrimidine-2,4-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1NC(=O)N(C=C1)C2OC(C(O)C2)CNC(c3ccccc3)c4nccn4C
InChI InChI 1.03 InChI=1S/C20H23N5O4/c1-24-10-8-21-19(24)18(13-5-3-2-4-6-13)22-12-15-14(26)11-17(29-15)25-9-7-16(27)23-20(25)28/h2-10,14-15,17-18,22,26H,11-12H2,1H3,(H,23,27,28)/t14-,15+,17+,18?/m0/s1
InChIKey InChI 1.03 KPWKGDCQLFIJMC-URHIDPGUSA-N
SMILES_CANONICAL CACTVS 3.370 Cn1ccnc1[C@H](NC[C@H]2O[C@H](C[C@@H]2O)N3C=CC(=O)NC3=O)c4ccccc4
SMILES CACTVS 3.370 Cn1ccnc1[CH](NC[CH]2O[CH](C[CH]2O)N3C=CC(=O)NC3=O)c4ccccc4
SMILES_CANONICAL OpenEye OEToolkits 1.7.2 Cn1ccnc1C(c2ccccc2)NC[C@@H]3[C@H](C[C@@H](O3)N4C=CC(=O)NC4=O)O
SMILES OpenEye OEToolkits 1.7.2 Cn1ccnc1C(c2ccccc2)NCC3C(CC(O3)N4C=CC(=O)NC4=O)O
Chemical Database Mapping
Database Reference ID
PubChem 137349196