Structural Complex
Chemical ID: 2TU
IUPAC Name: 1-(beta-D-ribofuranosyl)-2-thioxo-2,3-dihydropyrimidin-4(1H)-one
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2CCCO2)c(=S)[nH]1
InChI: InChI=1S/C8H10N2O2S/c11-6-3-4-10(8(13)9-6)7-2-1-5-12-7/h3-4,7H,1-2,5H2,(H,9,11,13)/t7-/m1/s1
InChI Key: ODHVJFXVWXRVSP-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H12 N2 O5 S
Molecular weight: 260.267
Hydrogen Bond Acceptor: 7
Hydrogen Bond Donor: 4
Rotatable Bonds: 5
Heavy Atoms: 17
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-(beta-D-ribofuranosyl)-2-thioxo-2,3-dihydropyrimidin-4(1H)-one
OpenEye OEToolkits 1.7.2 1-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-2-sulfanylidene-pyrimidin-4-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1NC(=S)N(C=C1)C2OC(C(O)C2O)CO
InChI InChI 1.03 InChI=1S/C9H12N2O5S/c12-3-4-6(14)7(15)8(16-4)11-2-1-5(13)10-9(11)17/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,17)/t4-,6-,7-,8-/m1/s1
InChIKey InChI 1.03 GJTBSTBJLVYKAU-XVFCMESISA-N
SMILES_CANONICAL CACTVS 3.370 OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=O)NC2=S
SMILES CACTVS 3.370 OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=O)NC2=S
SMILES_CANONICAL OpenEye OEToolkits 1.7.2 C1=CN(C(=S)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
SMILES OpenEye OEToolkits 1.7.2 C1=CN(C(=S)NC1=O)C2C(C(C(O2)CO)O)O
Chemical Database Mapping
Database Reference ID
PubChem 3036443
ChEBI 60731
ZINC ZINC000004501448
SureChEMBL SCHEMBL41558