Structural Complex
Chemical ID: AO9
IUPAC Name: 5'-deoxy-5'-[(imidazo[2,1-b][1,3]thiazol-5-ylcarbonyl)amino]cytidine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(NC[C@@H]1CC[C@H](n2cccnc2=O)O1)c1cnc2sccn12
InChI: InChI=1S/C15H15N5O3S/c21-13(11-9-18-15-19(11)6-7-24-15)17-8-10-2-3-12(23-10)20-5-1-4-16-14(20)22/h1,4-7,9-10,12H,2-3,8H2,(H,17,21)/t10-,12+/m0/s1
InChI Key: SFGUDGSKHDJJIB-CMPLNLGQSA-N
Physiochemical Descriptor:
Formula: C15 H16 N6 O5 S
Molecular weight: 392.390
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 4
Rotatable Bonds: 7
Heavy Atoms: 27
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-deoxy-5'-[(imidazo[2,1-b][1,3]thiazol-5-ylcarbonyl)amino]cytidine
OpenEye OEToolkits 1.7.0 N-[[(2R,3S,4R,5R)-5-(4-azanyl-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]imidazo[2,1-b][1,3]thiazole-5-carboxamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1N=C(N)C=CN1C2OC(C(O)C2O)CNC(=O)c3cnc4sccn34
SMILES_CANONICAL CACTVS 3.370 NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CNC(=O)c3cnc4sccn34)[C@@H](O)[C@H]2O
SMILES CACTVS 3.370 NC1=NC(=O)N(C=C1)[CH]2O[CH](CNC(=O)c3cnc4sccn34)[CH](O)[CH]2O
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 c1csc2n1c(cn2)C(=O)NC[C@@H]3[C@H]([C@H]([C@@H](O3)N4C=CC(=NC4=O)N)O)O
SMILES OpenEye OEToolkits 1.7.0 c1csc2n1c(cn2)C(=O)NCC3C(C(C(O3)N4C=CC(=NC4=O)N)O)O
InChI InChI 1.03 InChI=1S/C15H16N6O5S/c16-9-1-2-21(14(25)19-9)13-11(23)10(22)8(26-13)6-17-12(24)7-5-18-15-20(7)3-4-27-15/h1-5,8,10-11,13,22-23H,6H2,(H,17,24)(H2,16,19,25)/t8-,10-,11-,13-/m1/s1
InChIKey InChI 1.03 NPCKGXDYODQBDY-UORFTKCHSA-N
Chemical Database Mapping
Database Reference ID
PubChem 49837888
ZINC ZINC000064746500