Structural Complex
Chemical ID: PRD_900108
IUPAC Name: methyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->2)-alpha-D-mannopyranosyl-(1->3)-[alpha-D-mannopyranosyl-(1->6)-6-thio -alpha-D-mannopyranosyl-(1->6)]-beta-D-mannopyranoside
Formal Charge: ?
Type: saccharide
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CC[C@H](O[C@H]2CCCO[C@@H]2O[C@@H]2CCO[C@H](CO[C@@H]3CCC[C@@H](CS[C@@H]4CCCCO4)O3)C2)OC1
InChI: InChI=1S/C27H46O8S/c1-3-13-29-24(9-1)35-23-8-6-15-31-27(23)34-20-12-16-28-22(17-20)18-32-25-10-5-7-21(33-25)19-36-26-11-2-4-14-30-26/h20-27H,1-19H2/t20-,21+,22+,23+,24+,25+,26-,27-/m1/s1
InChI Key: CVIKOTDPCPWVBM-YZRPDWOZSA-N
Physiochemical Descriptor:
Formula: C33 H57 N O25 S
Molecular weight: 899.862
Hydrogen Bond Acceptor: 26
Hydrogen Bond Donor: 16
Rotatable Bonds: 32
Heavy Atoms: 60
Systematic name
Program Version Descriptor
ACDLabs 10.04 methyl 2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->2)-alpha-D-mannopyranosyl-(1->3)-[alpha-D-mannopyranosyl-(1->6)-6-thio -alpha-D-mannopyranosyl-(1->6)]-beta-D-mannopyranoside
OpenEye OEToolkits 1.5.0 N-[(2S,3R,4R,5S,6R)-2-[(2R,3S,4S,5S,6R)-2-[(2R,3S,4S,5R,6R)-3,5-dihydroxy-2-methoxy-6-[[(2S,3S,4S,5S,6S)-3,4,5-trihydro xy-6-[[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylmethyl]oxan-2-yl]oxymethyl]oxan-4-yl]oxy-4,5 -dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(NC5C(O)C(O)C(OC5OC4C(O)C(O)C(OC4OC1C(O)C(OC(OC)C1O)COC3OC(CSC2OC(C(O)C(O)C2O)CO)C(O)C(O)C3O)CO)CO)C
SMILES_CANONICAL CACTVS 3.341 CO[C@@H]1O[C@H](CO[C@H]2O[C@H](CS[C@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]3O)[C@@H](O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H](O[C @H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@@H]1O
SMILES CACTVS 3.341 CO[CH]1O[CH](CO[CH]2O[CH](CS[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O[CH]4O[CH](CO)[CH](O)[ CH](O)[CH]4O[CH]5O[CH](CO)[CH](O)[CH](O)[CH]5NC(C)=O)[CH]1O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O[C@H]2[C@H]([C@@H]([C@H](O[C@@H]2O[C@H]3[C@@H]([C@H](O[C@H]([C@H]3O)OC)CO[C@@H ]4[C@H]([C@H]([C@@H]([C@H](O4)CS[C@@H]5[C@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)O)O)O)CO)O)O)CO)O)O
SMILES OpenEye OEToolkits 1.5.0 CC(=O)NC1C(C(C(OC1OC2C(C(C(OC2OC3C(C(OC(C3O)OC)COC4C(C(C(C(O4)CSC5C(C(C(C(O5)CO)O)O)O)O)O)O)O)CO)O)O)CO)O)O
InChI InChI 1.03 InChI=1S/C33H57NO25S/c1-8(38)34-14-20(44)15(39)9(3-35)53-29(14)59-28-23(47)17(41)10(4-36)54-32(28)58-27-19(43)12(55-30( 51-2)26(27)50)6-52-31-24(48)21(45)18(42)13(56-31)7-60-33-25(49)22(46)16(40)11(5-37)57-33/h9-33,35-37,39-50H,3-7H2,1-2H3, (H,34,38)/t9-,10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21+,22+,23+,24+,25+,26+,27+,28+,29+,30-,31+,32-,33-/m1/s1
InChIKey InChI 1.03 ROKHVBHTOKKHED-VJVCVSGKSA-N
Chemical Database Mapping
Database Reference ID
PubChem 24832035
ZINC ZINC000263620982