Structural Complex
Chemical ID: WMJ
IUPAC Name: 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(NC[C@@H]1CC[C@@H](n2ccc(=O)[nH]c2=O)O1)Nc1ccccc1
InChI: InChI=1S/C16H18N4O4/c21-13-8-9-20(16(23)19-13)14-7-6-12(24-14)10-17-15(22)18-11-4-2-1-3-5-11/h1-5,8-9,12,14H,6-7,10H2,(H2,17,18,22)(H,19,21,23)/t12-,14-/m0/s1
InChI Key: TWBUDPHVFJTFHT-JSGCOSHPSA-N
Physiochemical Descriptor:
Formula: C17 H19 N5 O7
Molecular weight: 405.362
Hydrogen Bond Acceptor: 8
Hydrogen Bond Donor: 4
Rotatable Bonds: 7
Heavy Atoms: 29
Systematic name
Program Version Descriptor
ACDLabs 12.01 2',5'-dideoxy-5'-{[(4-nitrophenyl)carbamoyl]amino}-3,4-dihydrothymidine
OpenEye OEToolkits 1.9.2 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 [O-][N+](=O)c1ccc(cc1)NC(=O)NCC3OC(N2C(=O)NC(=O)C(=C2)C)CC3O
InChI InChI 1.03 InChI=1S/C17H19N5O7/c1-9-8-21(17(26)20-15(9)24)14-6-12(23)13(29-14)7-18-16(25)19-10-2-4-11(5-3-10)22(27)28/h2-5,8,12-14,23H,6-7H2,1H3,(H2,18,19,25)(H,20,24,26)/t12-,13+,14-/m0/s1
InChIKey InChI 1.03 GGXGAHUHZPSFRR-MJBXVCDLSA-N
SMILES_CANONICAL CACTVS 3.385 CC1=CN([C@@H]2C[C@H](O)[C@@H](CNC(=O)Nc3ccc(cc3)[N+]([O-])=O)O2)C(=O)NC1=O
SMILES CACTVS 3.385 CC1=CN([CH]2C[CH](O)[CH](CNC(=O)Nc3ccc(cc3)[N+]([O-])=O)O2)C(=O)NC1=O
SMILES_CANONICAL OpenEye OEToolkits 1.9.2 CC1=CN(C(=O)NC1=O)[C@@H]2C[C@@H]([C@H](O2)CNC(=O)Nc3ccc(cc3)[N+](=O)[O-])O
SMILES OpenEye OEToolkits 1.9.2 CC1=CN(C(=O)NC1=O)C2CC(C(O2)CNC(=O)Nc3ccc(cc3)[N+](=O)[O-])O
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL2178479
PubChem 71462564
ZINC ZINC000095578670