Structural Complex
Chemical ID: PRD_000762
IUPAC Name: METHANOBACTIN MB-OB3B
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC2=C3C(=O)O[CH]N3[Cu@@+2]3(S2)SC2=C4C(=O)O[C]([C@@H]5CCCN5C(=O)[C@H](Cc5ccccc5)NC(=O)[C@H](CSSCCNC(=O)CN2)NC(=O)CN1)N43
InChI: InChI=1S/C32H37N9O9S4.Cu/c42-21-12-36-29(52)25-32(48)50-27(40-25)20-7-4-9-41(20)30(46)18(11-17-5-2-1-3-6-17)39-26(45)19(15-54-53-10-8-33-21)38-23(44)14-34-22(43)13-35-28(51)24-31(47)49-16-37-24;/h1-3,5-6,16,18-20H,4,7-15H2,(H,33,42)(H,34,43)(H,38,44)(H,39,45)(H2,35,47,51)(H2,36,48,52);/q-2;+6/p-2/t18-,19-,20-;/m0./s1
InChI Key: CXODKESKCDUVHJ-HBSNOMOYSA-L
Physiochemical Descriptor:
Formula: C45 H56 Cu N10 O16 S5
Molecular weight: 1216.855
Hydrogen Bond Acceptor: 25
Hydrogen Bond Donor: 11
Rotatable Bonds: 19
Heavy Atoms: 77
Systematic name
Program Version Descriptor
ACDLabs 12.01 [N-{[(2R)-2-(3-methylbutanoyl)-5-oxo-1,3-oxazolidin-4-ylidene-kappaN](sulfanyl-kappaS)methyl}glycyl-N-[(6R,9R,14S,17S,22aR)-9-{[(1R)-1-carboxy-3-(methylsulfanyl)propyl]carbamoyl}-3-formyl-17-(4-hydroxybenzyl)-6-(hydroxymethyl)-1,7,15,18-tetraoxo-4-(sulfanyl-kappaS)-1,2,5,6,7,8,9,10,13,14,15,16,17,18,20,21,22,22a-octadecahydropyrrolo[2,1-m][1,2,5,8,11,14,17]dithiapentaazacycloicosin-14-yl-kappaN~2~]-L-serinamidato(4-)]copper(2+)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)C(NC(=O)C7NC(=O)C(Nc3s[Cu+2]24sc(c1C(=O)OC(C(=O)CC(C)C)n12)NCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)N5C(C(=O)n4c3C=O)CCC5)Cc6ccc(O)cc6)CSSC7)CO)CO)CCSC
InChI InChI 1.03 InChI=1S/C45H61N10O16S5.Cu/c1-21(2)13-32(60)40-54-34(45(70)71-40)42(73)46-15-33(61)47-26(16-56)35(62)51-30-20-76-75-19-29(37(64)48-24(44(68)69)10-12-74-3)52-36(63)27(17-57)53-41(72)28(18-58)50-39(66)31-5-4-11-55(31)43(67)25(49-38(30)65)14-22-6-8-23(59)9-7-22;/h6-9,18,21,24-27,29-31,40,56-57H,4-5,10-17,19-20H2,1-3H3,(H12,46,47,48,49,50,51,52,53,58,59,61,62,63,64,65,66,68,69,70,72,73);/q-1;+6/p-3/t24?,25-,26+,27?,29-,30+,31-,40?;/m0./s1
InChIKey InChI 1.03 OOXQWGQIAHQGHU-BOORZAAKSA-K
SMILES_CANONICAL CACTVS 3.370 CSCC[C@H](NC(=O)[C@@H]1CSSC[C@@H]2NC(=O)[C@H](CO)NC(=O)CNC3=C4N([C](OC4=O)C(=O)CC(C)C)[Cu@@++]5(S3)SC(=C([C]=O)[N@]5C(=O)[C@@H]6CCCN6C(=O)[C@H](Cc7ccc(O)cc7)NC2=O)N[C@@H](CO)C(=O)N1)C(O)=O
SMILES CACTVS 3.370 CSCC[CH](NC(=O)[CH]1CSSC[CH]2NC(=O)[CH](CO)NC(=O)CNC3=C4N([C](OC4=O)C(=O)CC(C)C)[Cu++]5(S3)SC(=C([C]=O)[N]5C(=O)[CH]6CCCN6C(=O)[CH](Cc7ccc(O)cc7)NC2=O)N[CH](CO)C(=O)N1)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC(C)CC(=O)[C]1N2C(=C3NCC(=O)N[C@H](C(=O)N[C@H]4CSSC[C@H](NC(=O)[C@@H](NC5=C(N([Cu+2]2(S5)S3)C(=O)[C@@H]6CCCN6C(=O)[C@@H](NC4=O)Cc7ccc(cc7)O)[C]=O)CO)C(=O)N[C@@H](CCSC)C(=O)O)CO)C(=O)O1
SMILES OpenEye OEToolkits 1.7.6 CC(C)CC(=O)[C]1N2C(=C3NCC(=O)NC(C(=O)NC4CSSCC(NC(=O)C(NC5=C(N([Cu+2]2(S5)S3)C(=O)C6CCCN6C(=O)C(NC4=O)Cc7ccc(cc7)O)[C]=O)CO)C(=O)NC(CCSC)C(=O)O)CO)C(=O)O1