Structural Complex
Chemical ID: PRD_000725
IUPAC Name: PYOVERDIN R Fe Complex
Formal Charge: ?
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC(=O)CNC(=O)[C@@H]2CCCN[O][Fe+3]3([O]NCCCCN1)[O]c1cc4ccc5[n+](c4cc1[O]3)[C@@H](CCN5)C(=O)NC[C@@H]1NCC[C@H](N1)C(=O)N2
InChI: InChI=1S/C32H47N11O9.Fe/c44-24-14-19-5-6-27-34-13-8-22(43(27)23(19)15-25(24)45)32(50)37-16-26-33-12-7-21(41-26)31(49)42-20(4-3-11-40-52)30(48)38-18-29(47)36-17-28(46)35-9-1-2-10-39-51;/h5-6,14-15,20-22,26,33,39-41H,1-4,7-13,16-18H2,(H7,34,35,36,37,38,42,44,45,46,47,48,49,50);/q-2;+7/p-1/t20-,21-,22-,26+;/m0./s1
InChI Key: SFAZMSBATXKORD-ZPRNHRNCSA-M
Physiochemical Descriptor:
Formula: C48 H64 Fe N15 O21
Molecular weight: 1242.955
Hydrogen Bond Acceptor: 24
Hydrogen Bond Donor: 15
Rotatable Bonds: 14
Heavy Atoms: 85
Systematic name
Program Version Descriptor
ACDLabs 12.01 [N~2~-({(2S,4S)-2-[(R)-carboxy({[(1R)-5-[(3-carboxypropanoyl)amino]-8,9-di(hydroxy-kappaO)-1,2,3,4-tetrahydropyrimido[1,2-a]quinolin-11-ium-1-yl]carbonyl}amino)methyl]hexahydropyrimidin-4-yl}carbonyl)-N~5~-(formyl-kappaO)-N~5~-(hydroxy-kappaO)-L-ornithyl-L-glutaminyl-D-glutaminyl-N~5~-(formyl-kappaO)-N~5~-(hydroxy-kappaO)-L-ornithylglycinato(4-)]iron(4+)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)CCC(=O)Nc1cc6c4[n+]2c1NCCC2C(=O)NC(C(=O)O)C9NCCC(C(=O)NC8C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NCC(=O)O)CCCn3o[Fe+3]57(oc3)(oc(c4)c(o5)c6)ocn(o7)CCC8)CCC(=O)N)CCC(=O)N)N9
InChI InChI 1.03 InChI=1S/C48H65N15O21.Fe/c49-34(68)7-5-26(44(77)56-24(3-1-15-61(83)21-64)42(75)53-20-38(73)74)59-45(78)27(6-8-35(50)69)58-43(76)25(4-2-16-62(84)22-65)57-46(79)28-11-13-51-40(55-28)39(48(81)82)60-47(80)30-12-14-52-41-29(54-36(70)9-10-37(71)72)17-23-18-32(66)33(67)19-31(23)63(30)41;/h17-19,21-22,24-28,30,39-40,51,55H,1-16,20H2,(H16,49,50,52,53,54,56,57,58,59,60,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82);/q-2;+7/p-1
InChIKey InChI 1.03 NDZSEZVMBUXIJJ-UHFFFAOYSA-M
SMILES_CANONICAL CACTVS 3.370 NC(=O)CC[C@H]1NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H]2CCC[N@]3O[Fe+3]45(|O=C[N@](CCC[C@H](NC1=O)C(=O)NCC(O)=O)O4)(|O=C3)Oc6cc7cc(NC(=O)CCC(O)=O)c8NCC[C@@H](C(=O)N[C@@H]([C@@H]9NCC[C@H](N9)C(=O)N2)C(O)=O)[n+]8c7cc6O5
SMILES CACTVS 3.370 NC(=O)CC[CH]1NC(=O)[CH](CCC(N)=O)NC(=O)[CH]2CCC[N]3O[Fe+3]45(|O=C[N](CCC[CH](NC1=O)C(=O)NCC(O)=O)O4)(|O=C3)Oc6cc7cc(NC(=O)CCC(O)=O)c8NCC[CH](C(=O)N[CH]([CH]9NCC[CH](N9)C(=O)N2)C(O)=O)[n+]8c7cc6O5
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 c1c2cc3c4cc2[n+]5c(c1NC(=O)CCC(=O)O)NCC[C@H]5C(=O)N[C@@H](C6NCC[C@H](N6)C(=O)N[C@H]7CCCN8C=O[Fe+3]9(O3)(O4)(O8)O=CN(O9)CCC[C@H](NC(=O)[C@H](NC(=O)[C@@H](NC7=O)CCC(=O)N)CCC(=O)N)C(=O)NCC(=O)O)C(=O)O
SMILES OpenEye OEToolkits 1.7.6 c1c2cc3c4cc2[n+]5c(c1NC(=O)CCC(=O)O)NCCC5C(=O)NC(C6NCCC(N6)C(=O)NC7CCCN8C=O[Fe+3]9(O3)(O4)(O8)O=CN(O9)CCCC(NC(=O)C(NC(=O)C(NC7=O)CCC(=O)N)CCC(=O)N)C(=O)NCC(=O)O)C(=O)O
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