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Summary
Structure Feature
Experiment
Ligands & Environment
1BDO
pdb_00001bdo
10.2210/pdb1bdo/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
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FASTA Zipped(.gz)
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BTN
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
BTN
IUPAC Name:
BIOTIN
Formal Charge:
0
Type:
NON-POLYMER
Substructure
Substruture Type:
MurckoScaffold
SMILES:
O=C1N[C@H]2CSC[C@H]2N1
InChI:
InChI=1S/C5H8N2OS/c8-5-6-3-1-9-2-4(3)7-5/h3-4H,1-2H2,(H2,6,7,8)/t3-,4+
InChI Key:
YCAYTKNFKBHFCE-ZXZARUISSA-N
Physiochemical Descriptor:
Formula:
C10 H16 N2 O3 S
Molecular weight:
244.311
Hydrogen Bond Acceptor:
4
Hydrogen Bond Donor:
3
Rotatable Bonds:
5
Heavy Atoms:
16
Systematic name
Program
Version
Descriptor
ACDLabs
12.01
5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid
OpenEye OEToolkits
1.7.6
5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoic acid
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
12.01
O=C1NC2C(SCC2N1)CCCCC(=O)O
InChI
InChI
1.03
InChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/t6-,7-,9-/m0/s1
InChIKey
InChI
1.03
YBJHBAHKTGYVGT-ZKWXMUAHSA-N
SMILES_CANONICAL
CACTVS
3.385
OC(=O)CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12
SMILES
CACTVS
3.385
OC(=O)CCCC[CH]1SC[CH]2NC(=O)N[CH]12
SMILES_CANONICAL
OpenEye OEToolkits
1.7.6
C1[C@H]2[C@@H]([C@@H](S1)CCCCC(=O)O)NC(=O)N2
SMILES
OpenEye OEToolkits
1.7.6
C1C2C(C(S1)CCCCC(=O)O)NC(=O)N2
Chemical Database Mapping
Database
Reference ID
DrugBank
DB00121
ChEMBL
CHEMBL857
PubChem
171548
ChEBI
15956
ZINC
ZINC000035024346
SureChEMBL
SCHEMBL8763
HMDB
HMDB0000030
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