Structural Complex
Chemical ID: PRD_000227
IUPAC Name: VIRGINIAMYCIN S1
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CCN2C(=O)[C@H](Cc3ccccc3)NC(=O)[C@@H]3CCCN3C(=O)CNC(=O)[C@@H](NC(=O)c3ccccn3)COC(=O)[C@H](c3ccccc3)NC(=O)[C@@H]2C1
InChI: InChI=1S/C39H41N7O9/c47-26-16-19-46-31(21-26)37(52)44-33(25-12-5-2-6-13-25)39(54)55-23-29(43-35(50)27-14-7-8-17-40-27)34(49)41-22-32(48)45-18-9-15-30(45)36(51)42-28(38(46)53)20-24-10-3-1-4-11-24/h1-8,10-14,17,28-31,33H,9,15-16,18-23H2,(H,41,49)(H,42,51)(H,43,50)(H,44,52)/t28-,29-,30-,31-,33-/m0/s1
InChI Key: RQWRVZVLXPFCMU-PGIAVUQJSA-N
Physiochemical Descriptor:
Formula: C43 H49 N7 O10
Molecular weight: 823.890
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 4
Rotatable Bonds: 10
Heavy Atoms: 60
Systematic name
Program Version Descriptor
ACDLabs 12.01 N-[(6S,9S,10S,13R,15aS,22S,24aS)-22-benzyl-6-ethyl-10,23-dimethyl-5,8,12,15,17,21,24-heptaoxo-13-phenyldocosahydro-12H-pyrido[2,1-f]pyrrolo[2,1-l][1,4,7,10,13,16]oxapentaazacyclononadecin-9-yl]-3-hydroxypyridine-2-carboxamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C3OC(C(C(=O)NC(C(=O)N1CCCC1C(=O)N(C)C(C(=O)N4C(C(=O)NC3c2ccccc2)CC(=O)CC4)Cc5ccccc5)CC)NC(=O)c6ncccc6O)C
InChI InChI 1.03 InChI=1S/C43H49N7O10/c1-4-29-40(56)49-21-12-17-30(49)41(57)48(3)32(23-26-13-7-5-8-14-26)42(58)50-22-19-28(51)24-31(50)37(53)47-35(27-15-9-6-10-16-27)43(59)60-25(2)34(38(54)45-29)46-39(55)36-33(52)18-11-20-44-36/h5-11,13-16,18,20,25,29-32,34-35,52H,4,12,17,19,21-24H2,1-3H3,(H,45,54)(H,46,55)(H,47,53)
InChIKey InChI 1.03 FEPMHVLSLDOMQC-UHFFFAOYSA-N
SMILES_CANONICAL CACTVS 3.370 CC[C@H]1NC(=O)[C@@H](NC(=O)c2ncccc2O)[C@@H](C)OC(=O)[C@@H](NC(=O)[C@@H]3CC(=O)CCN3C(=O)[C@H](Cc4ccccc4)N(C)C(=O)[C@@H]5CCCN5C1=O)c6ccccc6
SMILES CACTVS 3.370 CC[CH]1NC(=O)[CH](NC(=O)c2ncccc2O)[CH](C)OC(=O)[CH](NC(=O)[CH]3CC(=O)CCN3C(=O)[CH](Cc4ccccc4)N(C)C(=O)[CH]5CCCN5C1=O)c6ccccc6
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC[C@@H]1C(=O)N2CCC[C@H]2C(=O)N([C@H](C(=O)N3CCC(=O)C[C@H]3C(=O)N[C@H](C(=O)O[C@@H]([C@@H](C(=O)N1)NC(=O)c4c(cccn4)O)C)c5ccccc5)Cc6ccccc6)C
SMILES OpenEye OEToolkits 1.7.6 CCC1C(=O)N2CCCC2C(=O)N(C(C(=O)N3CCC(=O)CC3C(=O)NC(C(=O)OC(C(C(=O)N1)NC(=O)c4c(cccn4)O)C)c5ccccc5)Cc6ccccc6)C
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL1886037
PubChem 122731
HMDB HMDB0030520