Structural Complex
Chemical ID: IMK
IUPAC Name: 2-(BETA-D-GLUCOPYRANOSYL)-5-METHYL-1-BENZIMIDAZOLE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2[nH]c([C@H]3CCCCO3)nc2c1
InChI: InChI=1S/C12H14N2O/c1-2-6-10-9(5-1)13-12(14-10)11-7-3-4-8-15-11/h1-2,5-6,11H,3-4,7-8H2,(H,13,14)/t11-/m1/s1
InChI Key: HVNSCLHOKBTGEE-LLVKDONJSA-N
Physiochemical Descriptor:
Formula: C14 H18 N2 O5
Molecular weight: 294.303
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 5
Rotatable Bonds: 7
Heavy Atoms: 21
Systematic name
Program Version Descriptor
ACDLabs 12.01 (1S)-1,5-anhydro-1-(5-methyl-1H-benzimidazol-2-yl)-D-glucitol
OpenEye OEToolkits 1.7.6 (2R,3S,4R,5R,6S)-2-(hydroxymethyl)-6-(5-methyl-1H-benzimidazol-2-yl)oxane-3,4,5-triol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 OC1C(O)C(O)C(OC1CO)c3nc2cc(ccc2n3)C
InChI InChI 1.03 InChI=1S/C14H18N2O5/c1-6-2-3-7-8(4-6)16-14(15-7)13-12(20)11(19)10(18)9(5-17)21-13/h2-4,9-13,17-20H,5H2,1H3,(H,15,16)/t9-,10-,11+,12-,13-/m1/s1
InChIKey InChI 1.03 XIJZORUYQZBFJK-UJPOAAIJSA-N
SMILES_CANONICAL CACTVS 3.370 Cc1ccc2[nH]c(nc2c1)[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O
SMILES CACTVS 3.370 Cc1ccc2[nH]c(nc2c1)[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 Cc1ccc2c(c1)nc([nH]2)[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
SMILES OpenEye OEToolkits 1.7.6 Cc1ccc2c(c1)nc([nH]2)C3C(C(C(C(O3)CO)O)O)O
Chemical Database Mapping
Database Reference ID
DrugBank DB03133
PubChem 49867153
ZINC ZINC000038378584