ISDA: 1U1B

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: PAX

IUPAC Name: 5'-PHOSPHOTHYMIDINE (3'-5')-PYROPHOSPHATE ADENOSINE 3'-PHOSPHATE

Formal Charge: -2

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ccn([C@H]2C[C@H](O[PH](=O)O[PH](=O)OC[C@@H]3CC[C@H](n4cnc5cncnc54)O3)CO2)c(=O)[nH]1

InChI: InChI=1S/C18H22N6O9P2/c25-14-3-4-23(18(26)22-14)16-5-12(7-29-16)32-35(28)33-34(27)30-8-11-1-2-15(31-11)24-10-21-13-6-19-9-20-17(13)24/h3-4,6,9-12,15-16,34-35H,1-2,5,7-8H2,(H,22,25,26)/t11-,12-,15+,16+/m0/s1

InChI Key: OPIRICMUATZWAH-YXAMBPQSSA-N

Physiochemical Descriptor:

Formula: C20 H27 N7 O20 P4

Molecular weight: 809.358

Hydrogen Bond Acceptor: 26

Hydrogen Bond Donor: 7

Rotatable Bonds: 21

Heavy Atoms: 51

Systematic name

Program	Version	Descriptor
OpenEye OEToolkits	1.5.0	[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methyl [[(2R,3S,5R)-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)-2-(phosphonooxymethyl)oxolan-3-yl]oxy-oxido-phosphoryl] phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES_CANONICAL	CACTVS	3.341	CC1=CN([C@H]2C[C@H](O[P]([O-])(=O)O[P]([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O[P](O)(O)=O)n4cnc5c(N)ncnc45)[C@@H](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES	CACTVS	3.341	CC1=CN([CH]2C[CH](O[P]([O-])(=O)O[P]([O-])(=O)OC[CH]3O[CH]([CH](O)[CH]3O[P](O)(O)=O)n4cnc5c(N)ncnc45)[CH](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O[P@@](=O)([O-])O[P@@](=O)([O-])OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)OP(=O)(O)O
SMILES	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)O)OP(=O)([O-])OP(=O)([O-])OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)OP(=O)(O)O
InChI	InChI	1.03	InChI=1S/C20H29N7O20P4/c1-8-3-26(20(30)25-18(8)29)12-2-9(10(43-12)4-41-48(31,32)33)45-51(39,40)47-50(37,38)42-5-11-15(46-49(34,35)36)14(28)19(44-11)27-7-24-13-16(21)22-6-23-17(13)27/h3,6-7,9-12,14-15,19,28H,2,4-5H2,1H3,(H,37,38)(H,39,40)(H2,21,22,23)(H,25,29,30)(H2,31,32,33)(H2,34,35,36)/p-2/t9-,10+,11+,12+,14+,15+,19+/m0/s1
InChIKey	InChI	1.03	DQGQNMNTNSHMMC-SLFMBYJQSA-L

Chemical Database Mapping

Database	Reference ID
PubChem	5289107

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