Structural Complex
Chemical ID: PRD_900079
IUPAC Name: HEPARIN HEPTASACCHARIDE
Formal Charge:
Type: saccharide
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CC[C@H](O[C@H]2CC[C@H](O[C@H]3CC[C@@H](O[C@H]4CC[C@H](O[C@H]5CC[C@@H](O[C@H]6CC[C@H](O[C@H]7CCCOC7)OC6)OC5)OC4)OC3)OC2)OC1
InChI: InChI=1S/C35H58O13/c1-2-17-37-30(5-1)44-25-6-12-32(39-19-25)46-27-8-14-34(41-21-27)48-29-10-15-35(42-23-29)47-28-9-13-33(40-22-28)45-26-7-11-31(38-20-26)43-24-4-3-16-36-18-24/h24-35H,1-23H2/t24-,25-,26-,27-,28-,29-,30-,31-,32-,33+,34+,35-/m0/s1
InChI Key: BENQMLFNBLJEBN-VLWYDZAESA-N
Physiochemical Descriptor:
Formula: C55 H98 O54 S6
Molecular weight: 1815.724
Hydrogen Bond Acceptor: 54
Hydrogen Bond Donor: 10
Rotatable Bonds: 67
Heavy Atoms: 115
Systematic name
Program Version Descriptor
ACDLabs 10.04 [(2R,3R,4S,5S)-3-{[(2R,3R,4S,5S,6R)-6-(dihydroxymethyl)-5-({(2R,3R,4S,5R,6R)-5-{[(2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-5 -({(2R,3R,4S,5R,6R)-5-{[(2S,3R,4S,5R,6R)-5-{[(2R,3R,4S,6S)-3,4-dimethoxy-6-(methoxymethyl)tetrahydro-2H-pyran-2-yl]oxy}- 3,4-dimethoxy-6-(methoxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-3,4-dimethoxy-6-[(sulfooxy)methyl]tetrahydro-2H-pyran-2-yl} oxy)-3,4-dimethoxytetrahydro-2H-pyran-2-yl]oxy}-3,4-bis(sulfooxy)-6-[(sulfooxy)methyl]tetrahydro-2H-pyran-2-yl}oxy)-3,4- dimethoxytetrahydro-2H-pyran-2-yl]oxy}-4-methoxy-5-(sulfooxy)tetrahydro-2H-pyran-2-yl]methyl hydrogen sulfate (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2R,3R,4S,5R,6R)-6-[(2S,3S,4S,5R,6R)-2-(dihydroxymethyl)-6-[(2R,3R,4S,5R,6R)-6-[(2R,3S,4S,5R,6R)-2-(dihydroxymethyl)-4 ,5-dimethoxy-6-[(2R,3R,4S,5S)-4-methoxy-5-sulfooxy-2-(sulfooxymethyl)oxan-3-yl]oxy-oxan-3-yl]oxy-4,5-disulfooxy-2-(sulfo oxymethyl)oxan-3-yl]oxy-4,5-dimethoxy-oxan-3-yl]oxy-3-[(2S,3R,4S,5R,6R)-5-[(3R,4S,6S)-3,4-dimethoxy-6-(methoxymethyl)oxa n-2-yl]oxy-3,4-dimethoxy-6-(methoxymethyl)oxan-2-yl]oxy-4,5-dimethoxy-oxan-2-yl]methyl hydrogen sulfate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=S(=O)(OCC7OCC(OS(=O)(=O)O)C(OC)C7OC6OC(C(O)O)C(OC5OC(C(OC4OC(C(OC3OC(COS(=O)(=O)O)C(OC2OC(COC)C(OC1OC(CC(OC)C1OC)COC) C(OC)C2OC)C(OC)C3OC)C(OC)C4OC)C(O)O)C(OS(=O)(=O)O)C5OS(=O)(=O)O)COS(=O)(=O)O)C(OC)C6OC)O
SMILES_CANONICAL CACTVS 3.341 COC[C@@H]1C[C@H](OC)[C@@H](OC)[C@H](O1)O[C@@H]2[C@@H](COC)O[C@@H](O[C@@H]3[C@@H](CO[S](O)(=O)=O)O[C@H](O[C@H]4[C@H](OC) [C@@H](OC)[C@@H](O[C@@H]4C(O)O)O[C@@H]5[C@@H](CO[S](O)(=O)=O)O[C@H](O[C@H]6[C@H](OC)[C@@H](OC)[C@@H](O[C@H]6C(O)O)O[C@@H ]7[C@@H](CO[S](O)(=O)=O)OC[C@H](O[S](O)(=O)=O)[C@H]7OC)[C@H](O[S](O)(=O)=O)[C@H]5O[S](O)(=O)=O)[C@H](OC)[C@H]3OC)[C@H](O C)[C@H]2OC
SMILES CACTVS 3.341 COC[CH]1C[CH](OC)[CH](OC)[CH](O1)O[CH]2[CH](COC)O[CH](O[CH]3[CH](CO[S](O)(=O)=O)O[CH](O[CH]4[CH](OC)[CH](OC)[CH](O[CH]4 C(O)O)O[CH]5[CH](CO[S](O)(=O)=O)O[CH](O[CH]6[CH](OC)[CH](OC)[CH](O[CH]6C(O)O)O[CH]7[CH](CO[S](O)(=O)=O)OC[CH](O[S](O)(=O )=O)[CH]7OC)[CH](O[S](O)(=O)=O)[CH]5O[S](O)(=O)=O)[CH](OC)[CH]3OC)[CH](OC)[CH]2OC
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 COC[C@@H]1C[C@@H]([C@H](C(O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2OC)OC)O[C@@H]3[C@H](O[C@@H]([C@@H]([C@H]3OC)OC)O[C@H]4[C @@H]([C@H]([C@@H](O[C@@H]4C(O)O)O[C@@H]5[C@H](O[C@@H]([C@@H]([C@H]5OS(=O)(=O)O)OS(=O)(=O)O)O[C@H]6[C@@H]([C@H]([C@@H](O[ C@H]6C(O)O)O[C@@H]7[C@H](OC[C@@H]([C@H]7OC)OS(=O)(=O)O)COS(=O)(=O)O)OC)OC)COS(=O)(=O)O)OC)OC)COS(=O)(=O)O)COC)OC)OC
SMILES OpenEye OEToolkits 1.5.0 COCC1CC(C(C(O1)OC2C(OC(C(C2OC)OC)OC3C(OC(C(C3OC)OC)OC4C(C(C(OC4C(O)O)OC5C(OC(C(C5OS(=O)(=O)O)OS(=O)(=O)O)OC6C(C(C(OC6C( O)O)OC7C(OCC(C7OC)OS(=O)(=O)O)COS(=O)(=O)O)OC)OC)COS(=O)(=O)O)OC)OC)COS(=O)(=O)O)COC)OC)OC
InChI InChI 1.03 InChI=1S/C55H98O54S6/c1-78-15-21-14-22(80-3)33(82-5)50(95-21)100-30-24(16-79-2)96-51(43(87-10)34(30)83-6)101-31-25(19-9 3-111(63,64)65)97-52(44(88-11)35(31)84-7)103-38-36(85-8)46(90-13)54(106-41(38)48(56)57)102-32-26(20-94-112(66,67)68)98-5 5(47(109-115(75,76)77)40(32)108-114(72,73)74)104-39-37(86-9)45(89-12)53(105-42(39)49(58)59)99-29-23(18-92-110(60,61)62)9 1-17-27(28(29)81-4)107-113(69,70)71/h21-59H,14-20H2,1-13H3,(H,60,61,62)(H,63,64,65)(H,66,67,68)(H,69,70,71)(H,72,73,74)( H,75,76,77)/t21-,22-,23+,24+,25+,26+,27-,28+,29+,30+,31+,32+,33+,34-,35-,36-,37-,38-,39-,40-,41-,42+,43+,44+,45+,46+,47+ ,50?,51-,52+,53+,54+,55+/m0/s1
InChIKey InChI 1.03 QNKPWFIPDVKGET-ARQCQYMKSA-N