Structural Complex
Chemical ID: CPA
IUPAC Name: 2'-DEOXYCYTIDINE-2'-DEOXYADENOSINE-3',5'-MONOPHOSPHATE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@H]1C[C@H](O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4cncnc43)O2)CO1
InChI: InChI=1S/C18H21N6O6P/c25-18-20-4-1-5-23(18)16-6-13(8-27-16)30-31(26)28-9-12-2-3-15(29-12)24-11-22-14-7-19-10-21-17(14)24/h1,4-5,7,10-13,15-16,31H,2-3,6,8-9H2/t12-,13-,15+,16+/m0/s1
InChI Key: DUASBUKOKGDEOQ-WMHQRMGPSA-N
Physiochemical Descriptor:
Formula: C19 H25 N8 O9 P
Molecular weight: 540.424
Hydrogen Bond Acceptor: 17
Hydrogen Bond Donor: 5
Rotatable Bonds: 13
Heavy Atoms: 37
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2R,3S,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-2-(hydroxymethyl)tetrahydrofuran-3-yl [(2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxytetrahydrofuran-2-yl]methyl hydrogen (R)-phosphate (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2R,3S,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-2-(hydroxymethyl)oxolan-3-yl] [(2R,3S,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1N=C(N)C=CN1C5OC(CO)C(OP(=O)(O)OCC4OC(n3cnc2c(ncnc23)N)CC4O)C5
SMILES_CANONICAL CACTVS 3.341 NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O[P@@](O)(=O)OC[C@H]3O[C@H](C[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](CO)O2
SMILES CACTVS 3.341 NC1=NC(=O)N(C=C1)[CH]2C[CH](O[P](O)(=O)OC[CH]3O[CH](C[CH]3O)n4cnc5c(N)ncnc45)[CH](CO)O2
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)CO[P@@](=O)(O)O[C@H]4C[C@@H](O[C@@H]4CO)N5C=CC(=NC5=O)N)O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)C3CC(C(O3)COP(=O)(O)OC4CC(OC4CO)N5C=CC(=NC5=O)N)O)N
InChI InChI 1.03 InChI=1S/C19H25N8O9P/c20-13-1-2-26(19(30)25-13)15-4-10(11(5-28)34-15)36-37(31,32)33-6-12-9(29)3-14(35-12)27-8-24-16-17(21)22-7-23-18(16)27/h1-2,7-12,14-15,28-29H,3-6H2,(H,31,32)(H2,20,25,30)(H2,21,22,23)/t9-,10-,11+,12+,14+,15+/m0/s1
InChIKey InChI 1.03 LYWWDKIADIGKTH-IDMWBNCISA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB02573
ChEMBL CHEMBL1088749
PubChem 448286
ChEBI 165811
ZINC ZINC000015894754